SecReT4
T4SS ID219
StrainRhizobium etli CFN 42
Repliconplasmid symbiotic plasmid p42d [Browse all T4SS(s) in this replicon]
AccessionNC_004041
Location161901..171502; 180067..181986
NameVirB
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111111
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_004041
Region 1: 161901..171502
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1RHE_PD00139159233..160111 [+], 87989255348conjugal transfer antirestriction protein 
2RHE_PD00140160299..160619 [+], 32121492822hypothetical protein 
3RHE_PD00141160891..161340 [-], 45021492821hypothetical protein 
4RHE_PD00142161361..161897 [+], 53789255349hypothetical protein 
5RHE_PD00143161901..162569 [+], 66921492819transport secretion system IV, VirB1 protein  VirB1
6RHE_PD00144162566..162865 [+], 30021492818transport secretion system IV, VirB2 protein  VirB2
7RHE_PD00145162871..163209 [+], 33921492817transport secretion system IV, VirB3 protein  VirB3
8RHE_PD00146163181..165568 [+], 238821492816transport secretion system IV, VirB4 protein  VirB4
9RHE_PD00147165565..166266 [+], 70221492815transport secretion system IV, VirB5 protein  VirB5
10RHE_PD00148166499..167431 [+], 93321492814transport secretion system IV, VirB6 protein  VirB6
11RHE_PD00149167473..167754 [+], 28221492813transport secretion system IV, VirB7 protein  VirB7
12RHE_PD00150167756..168427 [+], 67289255350transport secretion system IV, VirB8 protein  VirB8
13RHE_PD00151168424..169281 [+], 85821492811transport secretion system IV, VirB9 protein  VirB9
14RHE_PD00152169290..170465 [+], 117621492810transport secretion system IV, VirB10 protein  VirB10
15RHE_PD00153170474..171502 [+], 102921492809transport secretion system IV, VirB11 protein  VirB11
16RHE_PD00154171539..172084 [-], 54689255351hypothetical protein 
17RHE_PD00155172105..172731 [-], 62721492807excisonase 
18RHE_PD00156173058..174248 [-], 119189255352hypothetical protein 
19RHE_PD00158176165..176431 [+], 26789255353hypothetical protein 
 
Region 2: 180067..181986
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1RHE_PD00158176165..176431 [+], 26789255353hypothetical protein 
2RHE_PD00159176485..176832 [-], 34889255354hypothetical protein 
3RHE_PD00160176816..177334 [+], 51921492803hypothetical protein 
4RHE_PD00161177292..177756 [+], 46521492802hypothetical protein 
5RHE_PD00162178350..178655 [-], 30621492801hypothetical protein 
6RHE_PD00163178723..179154 [-], 43221492800hypothetical protein 
7RHE_PD00164179158..179478 [+], 32121492799hypothetical protein 
8RHE_PD00165179475..179876 [+], 40221492798hypothetical protein 
9RHE_PD00166179789..180058 [+], 27021492797hypothetical protein 
10RHE_PD00167180067..181986 [-], 192021492796conjugal transfer coupling protein TraG  VirD4
11RHE_PD00168181977..182216 [-], 24089255355conjugal transfer protein D 
12RHE_PD00169182206..182493 [-], 28821492794conjugal transfer protein C 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Gonzalez V; Santamaria RI; Bustos P; Hernandez-Gonzalez I; Medrano-Soto A; Moreno-Hagelsieb G; Janga SC; Ramirez MA; Jimenez-Jacinto V; Collado-Vides J; Davila G (2006). The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons. Proc Natl Acad Sci U S A. 103(10):3834-9. [PudMed:16505379]