SecReT4
T4SS ID220
StrainOchrobactrum anthropi ATCC 49188
Repliconchromosome 1 [Browse all T4SS(s) in this replicon]
AccessionNC_009667
Location674591..676504; 702280..711870
NameVirB
Functioneffector translocation
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111111
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_009667
Region 1: 674591..676504
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Oant_0643670685..671677 [+], 993153007985DeoR family transcriptional regulator 
2Oant_0644671850..673289 [-], 1440153007986hypothetical protein 
3Oant_0645673621..674061 [+], 441153007987YecA family protein 
4Oant_0646674221..674547 [+], 327153007988hypothetical protein 
5Oant_0647674591..676504 [-], 1914153007989conjugal transfer coupling protein TraG  VirD4
6Oant_0648676501..676734 [-], 234153007990conjugal transfer TraD family protein 
7Oant_0649676724..677011 [-], 288153007991TraC family protein 
 
Region 2: 702280..711870
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Oant_0667698297..699055 [-], 759153008006regulatory protein IclR 
2Oant_0668699146..699409 [+], 264153008007XRE family transcriptional regulator 
3Oant_0669699432..699659 [-], 228153008008XRE family transcriptional regulator 
4Oant_0670699896..700729 [+], 834153008009regulatory protein LuxR 
5Oant_0671700771..701070 [+], 300153008010hypothetical protein 
6Oant_0672701301..701648 [-], 348153008011hypothetical protein 
7Oant_0673701740..702276 [+], 537153008012hypothetical protein 
8Oant_0674702280..702969 [+], 690153008013virB1 type IV secretion protein  VirB1
9Oant_0675702966..703265 [+], 300153008014VIRB2 type IV secretion fmaily protein  VirB2
10Oant_0676703269..703610 [+], 342153008015type IV secretory pathway VirB3 family protein  VirB3
11Oant_0677703603..705993 [+], 2391153008016type IV secretion/conjugal transfer ATPase  VirB4
12Oant_0678705993..706691 [+], 699153008017P-type DNA transfer protein VirB5  VirB5
13Oant_0679706688..706921 [+], 234153008018hypothetical protein 
14Oant_0680706926..707840 [+], 915153008019TrbL/VirB6 plasmid conjugal transfer protein  VirB6
15Oant_0681707837..708148 [+], 312153008020hypothetical protein  VirB7
16Oant_0682708148..708819 [+], 672153008021VirB8 family protein  VirB8
17Oant_0683708819..709679 [+], 861153008022P-type conjugative transfer protein VirB9  VirB9
18Oant_0684709685..710860 [+], 1176153008023conjugation TrbI family protein  VirB10
19Oant_0685710869..711870 [+], 1002153008024P-type DNA transfer ATPase VirB11  VirB11
20Oant_0686712091..714754 [+], 2664153008025pyruvate phosphate dikinase 
21Oant_0687714826..715656 [+], 831153008026polysaccharide deacetylase 
22Oant_0688715681..716061 [-], 381153008027hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes

Effectors
BPE005, RicA, BPE275, BPE043, BPE123

The information of protein effectors
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  *
1Oant_0964 1001868..1002326 [-], 459153008299cyclic nucleotide-binding protein  BPE005
2Oant_1933 2034678..2035205 [+], 528153009263ferripyochelin-binding protein  RicA
3Oant_1937 2037903..2038583 [+], 681153009267rhomboid family protein  BPE275
4Oant_2111 2210160..2214923 [-], 4764153009441hypothetical protein  BPE043
5Oant_4219 1644549..1645010 [+], 462153011534hypothetical protein  BPE123

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Proteins        Genes
Identified as part of this study from NC_009667