SecReT4
T4SS ID235
StrainPseudomonas putida plasmid pW2 (NC_013176)
Repliconplasmid pW2 [Browse all T4SS(s) in this replicon]
AccessionNC_013176
Location1310..22336; 73493..75251
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111011111
ComponentTrbKTrbLTrbNTraFTraG
Number11111

The information of T4SS components from NC_013176
Region 1: 1310..22336
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pW2_01 (trbF)1310..2092 [+], 783257070293conjugal transfer protein TrbF  TrbF
2pW2_02 (trbG)2089..3009 [+], 921257070294conjugal transfer protein TrbG  TrbG
3pW2_07 (trbH)3012..3500 [+], 489257070295conjugal transfer protein TrbH  TrbH
4pW2_03 (trbI)3505..4926 [+], 1422257070296conjugal transfer protein TrbI  TrbI
5pW2_04 (trbJ)4947..5711 [+], 765257070297conjugal transfer protein TrbJ  TrbJ
6pW2_05 (trbK)5721..5948 [+], 228257070298TrbI  TrbK
7pW2_06 (trbL)5959..7677 [+], 1719257070299TrbL  TrbL
8pW2_08 (trbM)7695..8282 [+], 588257070300conjugal transfer protein TrbM 
9pW2_09 (trbN)8296..8931 [+], 636257070301conjugal transfer protein TrbN  TrbN
10pW2_10 (trbO)8960..9226 [+], 267257070302TrbO 
11pW2_11 (trbP)9226..9924 [+], 699257070303conjugal transfer protein TrbP 
12pW2_p0110441..11199 [+], 759257070304hypothetical protein 
13pW2_p0211201..12028 [-], 828257070305ORF13 
14pW2_p0312128..12733 [+], 606257070306transposase-like protein 
15pW2_12 (tniA)12559..14814 [+], 2256257070307TniA 
16pW2_13 (traC)13117..17400 [-], 4284257070308TraC 
17pW2_15 (traD)17404..17793 [-], 390257070310TraD 
18pW2_14 (traE)17815..19878 [-], 2064257070309TraE 
19pW2_16 (traF)19890..20426 [-], 537257070311conjugal transfer peptidase TraF  TraF
20pW2_17 (traG)20423..22336 [-], 1914257070312conjugal transfer coupling protein TraG  TraG
21pW2_18 (traI)22333..24573 [-], 2241257070313conjugal transfer relaxase TraI 
22pW2_19 (traH)22635..23027 [-], 393257070314TraH 
23pW2_p0424608..24982 [-], 375257070315conjugal transfer relaxosome component TraJ 
24pW2_20 (traL)25755..26480 [+], 726257070316conjugal transfer protein TraL 
25pW2_21 (traM)26480..26920 [+], 441257070317conjugal transfer protein TraM 
 
Region 2: 73493..75251
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pW2_p3170022..72784 [+], 2763257070357putative transposase 
2pW2_35 (trbA)72876..73196 [+], 321257070358TrbA 
3pW2_36 (trbB)73493..74455 [+], 963257070359conjugal transfer ATPase TrbB  TrbB
4pW2_37 (trbC)74472..74936 [+], 465257070360conjugal transfer protein TrbC  TrbC
5pW2_38 (trbD)74940..75251 [+], 312257070361conjugal transfer protein TrbD  TrbD
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_013176