SecReT4
T4SS ID238
StrainRhizobium leguminosarum bv. trifolii WSM1325
Repliconplasmid pR132503 [Browse all T4SS(s) in this replicon]
AccessionNC_012853
Location68435..77902; 98682..105323
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_012853
Region 1: 68435..77902
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Rleg_547863685..64878 [-], 1194241518218replication protein C 
2Rleg_547965188..66216 [-], 1029241518219plasmid partitioning protein RepB 
3Rleg_548066213..67430 [-], 1218241518220plasmid partitioning protein RepA 
4Rleg_548167795..68421 [+], 627241518221autoinducer synthesis protein 
5Rleg_548268435..69400 [+], 966241518222conjugal transfer protein TrbB  TrbB
6Rleg_548369390..69770 [+], 381241518223Conjugal transfer protein TrbC  TrbC
7Rleg_548469760..70059 [+], 300241518224conjugal transfer protein TrbD  TrbD
8Rleg_548570069..72516 [+], 2448241518225conjugal transfer protein TrbE  TrbE
9Rleg_548672488..73288 [+], 801241518226conjugal transfer protein TrbJ  TrbJ
10Rleg_548773285..73434 [+], 150241518227hypothetical protein 
11Rleg_548873508..74656 [+], 1149241518228conjugal transfer protein TrbL  TrbL
12Rleg_548974676..75338 [+], 663241518229conjugal transfer protein TrbF  TrbF
13Rleg_549075355..76176 [+], 822241518230conjugal transfer protein TrbG  TrbG
14Rleg_549176179..76607 [+], 429241518231conjugal transfer protein TrbH  TrbH
15Rleg_549276622..77902 [+], 1281241518232conjugal transfer protein TrbI  TrbI
16Rleg_549377928..78638 [-], 711241518233transcriptional regulator, LuxR family 
17Rleg_549579546..80628 [+], 1083241518234hypothetical protein 
18Rleg_549680625..81536 [+], 912241518235hypothetical protein 
 
Region 2: 98682..105323
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Rleg_550894312..95355 [-], 1044241518247extracellular solute-binding protein family 1 
2Rleg_550995889..96521 [+], 633241518248hypothetical protein 
3Rleg_551096638..96895 [+], 258241518249hypothetical protein 
4Rleg_551196911..97522 [-], 612241518250conjugal transfer protein TraH 
5Rleg_551297538..98692 [-], 1155241518251conjugal transfer protein TraB 
6Rleg_551398682..99248 [-], 567241518252conjugal transfer pilin processing protease TraF  TraF
7Rleg_551499245..102568 [-], 3324241518253Dtr system oriT relaxase 
8Rleg_5515102823..103119 [+], 297241518254TraC family protein 
9Rleg_5516103124..103339 [+], 216241518255Conjugal transfer TraD family protein 
10Rleg_5517103326..105323 [+], 1998241518256conjugal transfer coupling protein TraG  TraG
11Rleg_5518105681..105998 [-], 318241518257hypothetical protein 
12Rleg_5519106460..106726 [+], 267241518258WGR domain protein 
13Rleg_5520106996..107307 [-], 312241518259hypothetical protein 
14Rleg_5521107455..108042 [+], 588241518260hypothetical protein 
15Rleg_5522108249..109097 [-], 8492415182615-carboxymethyl-2-hydroxymuconate Delta-isomerase 
16Rleg_5523109113..110006 [-], 894241518262Acetoacetate decarboxylase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_012853