SecReT4
T4SS ID242
StrainBradyrhizobium japonicum USDA 110
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_004463
Location37305..43365; 9068090..9077553
NameTrb
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_004463
Region 1: 37305..43365
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1blr003432885..33310 [+], 42627375145transposase 
2blr003533307..33663 [+], 35727375146hypothetical protein 
3bsr003633782..33952 [+], 17127375147hypothetical protein 
4blr003733965..34321 [+], 35727375148hypothetical protein 
5bsr003834579..34860 [+], 28227375149transcriptional regulator 
6bsr003935259..35498 [+], 24027375150hypothetical protein 
7bll004035827..36150 [-], 32427375151hypothetical protein 
8bsl004136259..36432 [-], 17427375152hypothetical protein 
9bll004236857..37297 [-], 44127375153hypothetical protein 
10bll0043 (traG)37305..39332 [-], 202827375154conjugal transfer coupling protein TraG  TraG
11bll004439329..41203 [-], 187527375155hypothetical protein 
12bll004541537..42445 [-], 90927375156transglycosylase  TrbN
13bll004642450..42785 [-], 33627375157hypothetical protein 
14bll0047 (traF)42820..43365 [-], 54627375158conjugal transfer protein  TraF
15bll004843362..43880 [-], 51927375159hypothetical protein 
16bsl004943867..44133 [-], 26727375160hypothetical protein 
17bll005044130..44768 [-], 63927375161partition protein 
18bll0051 (repA)44765..46042 [-], 127827375162replication protein A 
19bll005245894..46265 [-], 37227375163hypothetical protein 
20bll005346349..47044 [-], 69627375164hypothetical protein 
21bsl005447255..47518 [-], 26427375165hypothetical protein 
22bsr005547732..47983 [+], 25227375166transcriptional regulator 
 
Region 2: 9068090..9077553
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1blr82739063445..9064566 [+], 112227383384transcriptional regulator 
2bll82749064872..9065573 [-], 70227383385hypothetical protein 
3bll82759065392..9066147 [-], 75627383386hypothetical protein 
4bll82769066200..9066865 [-], 66627383387hypothetical protein 
5bll82779066805..9067746 [-], 94227383388hypothetical protein 
6bsl82789067869..9068093 [-], 22527383389hypothetical protein 
7bll8279 (trbI)9068090..9069292 [-], 120327383390conjugal transfer protein  TrbI
8bll8280 (trbG)9069283..9070362 [-], 108027383391conjugal transfer protein  TrbG
9bll8281 (trbF)9070359..9071048 [-], 69027383392conjugal transfer protein TrbF  TrbF
10bll8282 (trbL)9071052..9072413 [-], 136227383393conjugal transfer protein TrbL  TrbL
11bll82839072410..9072730 [-], 32127383394hypothetical protein 
12bll8284 (trbJ)9072741..9073499 [-], 75927383395conjugal transfer protein TrbJ  TrbJ
13bll8285 (trbE)9073496..9075934 [-], 243927383396conjugal transfer ATPase TrbE  TrbE
14bsl8286 (trbD)9075942..9076220 [-], 27927383397conjugal transfer protein  TrbD
15bll8287 (trbC)9076217..9076558 [-], 34227383398conjugal transfer protein  TrbC
16bll8288 (trbB)9076555..9077553 [-], 99927383399conjugal transfer protein  TrbB
17blr82899077792..9078289 [+], 49827383400transposase 
18bll82909078152..9078973 [-], 82227383401transposase 
19bll82919078475..9079104 [-], 63027383402transposase 
20blr82929079279..9079632 [+], 35427383403hypothetical protein 
21bll82939079793..9080857 [-], 106527383404transposase 
22bll82949081154..9081555 [-], 40227383405hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Kaneko T; Nakamura Y; Sato S; Minamisawa K; Uchiumi T; Sasamoto S; Watanabe A; Idesawa K; Iriguchi M; Kawashima K; Kohara M; Matsumoto M; Shimpo S; Tsuruoka H; Wada T; Yamada M; Tabata S (2002). Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110. DNA Res. 9(6):189-97. [PudMed:12597275]