SecReT4
T4SS ID243
StrainOligotropha carboxidovorans OM5
Repliconplasmid pHCG3 [Browse all T4SS(s) in this replicon]
AccessionNC_015689
Location108113..132111
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_015689
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1OCA5_pHCG300990104410..105339 [+], 930337739219putative antirestriction protein ArdC 
2OCA5_pHCG301000106005..106358 [+], 354337739220hypothetical protein 
3OCA5_pHCG301010106694..106861 [+], 168337739221hypothetical protein 
4OCA5_pHCG301020106969..107214 [-], 246337739222hypothetical protein 
5OCA5_pHCG301030107449..107979 [-], 531337739223putative nuclease 
6OCA5_pHCG301040 (traG)108113..110023 [-], 1911337739224conjugal transfer coupling protein, VirD4 family  TraG
7OCA5_pHCG301050 (traD)110010..110225 [-], 216337739225conjugal transfer protein TraD 
8OCA5_pHCG301060 (traC)110230..110499 [-], 270337739226conjugal transfer protein TraC 
9OCA5_pHCG301070 (traA)110749..114060 [+], 3312337739227Ti-type conjugative transfer relaxase TraA 
10OCA5_pHCG301080 (traF)114057..114587 [+], 531337739228conjugative transfer signal peptidase TraF  TraF
11OCA5_pHCG301090 (traB)114589..115740 [+], 1152337739229conjugal transfer protein TraB 
12OCA5_pHCG301100 (traH)115751..116350 [+], 600337739230conjugal transfer protein TraH  TrbN
13OCA5_pHCG301110116405..116671 [-], 267337739231hypothetical protein 
14OCA5_pHCG301140119934..120260 [-], 327337739232hypothetical protein 
15OCA5_pHCG301150 (traM)120994..121320 [+], 327337739233transcriptional repressor 
16OCA5_pHCG301160 (traR)121338..122057 [-], 720337739234putative transcriptional activator protein TraR 
17OCA5_pHCG301170 (trbI)122601..123899 [-], 1299337739235conjugal transfer protein TrbI  TrbI
18OCA5_pHCG301180 (trbH)123912..124352 [-], 441337739236conjugal transfer protein TrbH  TrbH
19OCA5_pHCG301190 (trbG)124355..125191 [-], 837337739237conjugal transfer protein TrbG  TrbG
20OCA5_pHCG301200 (trbF)125215..125877 [-], 663337739238conjugal transfer protein TrbF  TrbF
21OCA5_pHCG301210 (trbL)125895..127091 [-], 1197337739239conjugal transfer protein TrbL  TrbL
22OCA5_pHCG301220127098..127280 [-], 183337739240hypothetical protein 
23OCA5_pHCG301230 (trbJ)127277..128080 [-], 804337739241P-type conjugative transfer protein TrbJ  TrbJ
24OCA5_pHCG301240 (trbE)128055..130493 [-], 2439337739242conjugal transfer protein TrbE  TrbE
25OCA5_pHCG301250 (trbD)130502..130801 [-], 300337739243conjugal transfer protein TrbD  TrbD
26OCA5_pHCG301260 (trbC)130794..131159 [-], 366337739244conjugal transfer protein TrbC  TrbC
27OCA5_pHCG301270 (trbB)131149..132111 [-], 963337739245P-type conjugative transfer ATPase TrbB  TrbB
28OCA5_pHCG301280 (traI)132126..132752 [-], 627337739246acyl-homoserine-lactone synthase TraI 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_015689