SecReT4
T4SS ID246
StrainNitrobacter hamburgensis X14
Repliconplasmid 3 [Browse all T4SS(s) in this replicon]
AccessionNC_007961
Location3442..25540; 118888..120813
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_007961
Region 1: 3442..25540
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Nham_4540122..3445 [+], 332492109664Dtr system oriT relaxase 
2Nham_45413442..3975 [+], 53492109665conjugal transfer pilin processing protease TraF  TraF
3Nham_45423995..5131 [+], 113792109666conjugal transfer protein TraB 
4Nham_45435143..5766 [+], 62492109667conjugal transfer protein TraH 
5Nham_45467284..8003 [+], 72092109668hypothetical protein 
6Nham_45488473..8919 [+], 44792109669hypothetical protein 
7Nham_45498944..9324 [-], 38192109670hypothetical protein 
8Nham_45509433..9933 [-], 50192109671heat shock protein Hsp20 
9Nham_455110019..10480 [-], 46292109672heat shock protein Hsp20 
10Nham_455210615..10905 [-], 29192109673hypothetical protein 
11Nham_455310902..11330 [-], 42992109674PilT protein-like 
12Nham_455411687..11944 [+], 25892109675hypothetical protein 
13Nham_455511949..12368 [+], 42092109676hypothetical protein 
14Nham_455613055..14200 [-], 114692109677transposase IS116/IS110/IS902 
15Nham_455714413..14742 [+], 33092109678hypothetical protein 
16Nham_455814844..15548 [-], 70592109679LuxR family transcriptional regulator 
17Nham_455915988..17289 [-], 130292109680conjugal transfer protein TrbI  TrbI
18Nham_456017300..17752 [-], 45392109681conjugal transfer protein TrbH  TrbH
19Nham_456117755..18594 [-], 84092109682conjugal transfer protein TrbG  TrbG
20Nham_456218612..19274 [-], 66392109683conjugal transfer protein TrbF  TrbF
21Nham_456319317..20471 [-], 115592109684conjugal transfer protein TrbL  TrbL
22Nham_456420484..20669 [-], 18692109685hypothetical protein 
23Nham_456520666..21463 [-], 79892109686conjugal transfer protein TrbJ  TrbJ
24Nham_456621435..23888 [-], 245492109687conjugal transfer protein TrbE  TrbE
25Nham_456723898..24197 [-], 30092109688conjugal transfer protein TrbD  TrbD
26Nham_456824190..24561 [-], 37292109689conjugal transfer protein TrbC  TrbC
27Nham_456924551..25540 [-], 99092109690conjugal transfer protein TrbB  TrbB
28Nham_457025537..26160 [-], 62492109691autoinducer synthesis protein 
29Nham_457126576..27790 [+], 121592109692cobyrinic acid a,c-diamide synthase 
30Nham_457227787..28818 [+], 103292109693parB-like partition proteins 
31Nham_457329095..30420 [+], 132692109694replication initiation protein RepC 
 
Region 2: 118888..120813
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Nham_4666114944..115249 [+], 30692109766RelB antitoxin 
2Nham_4667115246..115557 [+], 31292109767addiction module toxin, RelE/StbE 
3Nham_4668115915..116307 [-], 39392109768hypothetical protein 
4Nham_4669117151..117630 [+], 48092109769single-strand binding protein 
5Nham_4670117712..117969 [-], 25892109770hypothetical protein 
6Nham_4671118053..118517 [-], 46592109771nuclease (SNase-like) 
7Nham_4672118888..120813 [-], 192692109772conjugal transfer coupling protein TraG  TraG
8Nham_4673120800..121015 [-], 21692109773conjugal transfer TraD 
9Nham_4674121020..121280 [-], 26192109774conjugal transfer protein TraC 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_007961