SecReT4
T4SS ID251
StrainAgrobacterium tumefaciens plasmid Ti plasmid pTiBo542 (NC_010929)
Repliconplasmid Ti plasmid pTiBo542 [Browse all T4SS(s) in this replicon]
AccessionNC_010929
Location90008..99663; 211052..217581
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number11011

The information of T4SS components from NC_010929
Region 1: 90008..99663
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pTiBo070 (moaD)85029..86795 [+], 1767190014707MoaD 
2pTiBo071 (moaA)86914..88482 [+], 1569190014708MoaA 
3pTiBo07288652..89047 [-], 396190014709orf_Bo072 
4pTiBo07389084..89737 [+], 654190014710orf_Bo073 
5pTiBo074 (trbI)90008..91312 [-], 1305190014711conjugal transfer protein TrbI  TrbI
6pTiBo075 (trbH)91325..91801 [-], 477190014712conjugal transfer protein TrbH  TrbH
7pTiBo076 (trbG)91801..92667 [-], 867190014713conjugal transfer protein TrbG  TrbG
8pTiBo077 (trbF)92673..93335 [-], 663190014714conjugal transfer protein TrbF  TrbF
9pTiBo078 (trbL)93350..94537 [-], 1188190014715conjugal transfer protein TrbL  TrbL
10pTiBo079 (trbK)94531..94749 [-], 219190014716TrbK  TrbK
11pTiBo080 (trbJ)94746..95555 [-], 810190014717conjugal transfer protein TrbJ  TrbJ
12pTiBo081 (trbE)95527..97995 [-], 2469190014718conjugal transfer protein TrbE  TrbE
13pTiBo082 (trbD)98006..98305 [-], 300190014719conjugal transfer protein TrbD  TrbD
14pTiBo083 (trbC)98298..98702 [-], 405190014720conjugal transfer protein TrbC  TrbC
15pTiBo084 (trbB)98692..99663 [-], 972190014721conjugal transfer protein TrbB  TrbB
16pTiBo085 (traI)99660..100298 [-], 639190014722putative autoinducer synthesis protein 
17pTiBo086 (repA)100664..101860 [+], 1197190014723RepA 
18pTiBo087 (repB)101963..102922 [+], 960190014724RepB 
19pTiBo088 (repC)103097..104311 [+], 1215190014725replication initiation protein RepC 
 
Region 2: 211052..217581
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pTiBo192206815..207138 [+], 324190014824orf_Bo192 
2pTiBo193207490..207915 [+], 426190014825orf_Bo193 
3pTiBo194208061..209005 [-], 945190014826orf_Bo194 
4pTiBo195209199..209321 [+], 123190014827orf_Bo195 
5pTiBo196209471..209749 [-], 279190014828orf_Bo196 
6pTiBo197209783..210166 [-], 384190014829orf_Bo197 
7pTiBo198210324..210839 [-], 516190014830orf_Bo198 
8pTiBo199210839..211036 [-], 198190014831orf_Bo199 
9pTiBo200 (traG)211052..212995 [-], 1944190014832conjugal transfer coupling protein TraG  TraG
10pTiBo201 (traD)212982..213197 [-], 216190014833conjugal transfer protein TraD 
11pTiBo202 (traC)213202..213498 [-], 297190014834conjugal transfer protein TraC 
12pTiBo203 (traA)213752..217054 [+], 3303190014835Dtr system oriT relaxase 
13pTiBo204 (traF)217051..217581 [+], 531190014836conjugal transfer pilin processing protease TraF  TraF
14pTiBo205 (traB)217502..218797 [+], 1296190014837conjugal transfer protein TraB 
15pTiBo206 (traH)218809..219438 [+], 630190014838conjugal transfer protein TraH 
16pTiBo207219457..220047 [+], 591190014839orf_Bo207 
17pTiBo208 (traM)220841..221149 [+], 309190014840TraM 
18pTiBo209221338..222066 [-], 729190014841orf_Bo209 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_010929