SecReT4
T4SS ID255
StrainSinorhizobium medicae WSM419
Repliconplasmid pSMED02 [Browse all T4SS(s) in this replicon]
AccessionNC_009621
Location342561..362264
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_009621
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Smed_5370338535..338681 [+], 147150377478hypothetical protein 
2Smed_5371339017..339226 [-], 210150377479hypothetical protein 
3Smed_5372339285..340004 [-], 7201503774805-formyltetrahydrofolate cyclo-ligase 
4Smed_5373340371..341213 [-], 843150377481LysR family transcriptional regulator 
5Smed_5375341930..342550 [+], 621150377482putative autoinducer synthesis protein 
6Smed_5376342561..343538 [+], 978150377483conjugal transfer protein TrbB  TrbB
7Smed_5377343528..343908 [+], 381150377484conjugal transfer protein TrbC  TrbC
8Smed_5378343901..344197 [+], 297150377485conjugal transfer protein TrbD  TrbD
9Smed_5379344208..346661 [+], 2454150377486conjugal transfer protein TrbE  TrbE
10Smed_5380346636..347436 [+], 801150377487conjugal transfer protein TrbJ  TrbJ
11Smed_5381347433..347633 [+], 201150377488hypothetical protein 
12Smed_5382347627..348835 [+], 1209150377489conjugal transfer protein TrbL  TrbL
13Smed_5383348813..349475 [+], 663150377490conjugal transfer protein TrbF  TrbF
14Smed_5384349492..350304 [+], 813150377491conjugal transfer protein TrbG  TrbG
15Smed_5385350308..350748 [+], 441150377492conjugal transfer protein TrbH  TrbH
16Smed_5386350761..352053 [+], 1293150377493conjugal transfer protein TrbI  TrbI
17Smed_5387352053..353015 [+], 963150377494autoinducer-binding domain-containing protein 
18Smed_5388353019..353342 [-], 324150377495conjugal transfer transcriptional regulator (repressor) protein 
19Smed_5389353561..353773 [+], 213150377496XRE family transcriptional regulator 
20Smed_5391354563..355726 [-], 1164150377497conjugal transfer protein TraB 
21Smed_5392355716..356282 [-], 567150377498conjugal transfer pilin processing protease TraF  TraF
22Smed_5393356279..359587 [-], 3309150377499Dtr system oriT relaxase 
23Smed_5394359842..360138 [+], 297150377500conjugal transfer protein TraC 
24Smed_5395360143..360358 [+], 216150377501conjugal transfer protein TraD 
25Smed_5396360345..362264 [+], 1920150377502conjugal transfer coupling protein TraG  TraG
26Smed_5397362653..363564 [-], 912150377503hypothetical protein 
27Smed_5398363688..364155 [+], 468150377504WGR domain-containing protein 
28Smed_5399364442..364753 [-], 312150377505hypothetical protein 
29Smed_5402365939..366163 [+], 225150377506XRE family transcriptional regulator 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_009621