SecReT4
T4SS ID257
StrainAcidovorax citrulli AAC00-1
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_008752
Location749121..749732; 777866..789835
NameTrb
Functionconjugation
ClassificationType IVA; Type P
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_008752
Region 1: 749121..749732
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Aave_0683744541..745023 [+], 483120609380putative lipoprotein 
2Aave_0684745368..746138 [+], 771120609381hypothetical protein 
3Aave_0685746250..746525 [+], 276120609382hypothetical protein 
4Aave_0686746552..747397 [+], 846120609383putative replication initiator and transcription repressor protein 
5Aave_0687747663..748301 [+], 639120609384cobyrinic acid a,c-diamide synthase 
6Aave_0688748298..748582 [+], 285120609385hypothetical protein 
7Aave_0689748579..749124 [+], 546120609386hypothetical protein 
8Aave_0690749121..749732 [+], 612120609387putative conjugal transfer TRAF transmembrane protein  TraF
9Aave_0691750181..752169 [+], 1989120609388hypothetical protein 
10Aave_0692752223..752546 [+], 324120609389transposase IS3/IS911 family protein 
11Aave_0693752579..753436 [+], 858120609390integrase catalytic subunit 
12Aave_0694753590..754684 [-], 1095120609391integrase catalytic subunit 
 
Region 2: 777866..789835
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Aave_0718773839..774210 [+], 372120609414small multidrug resistance protein 
2Aave_0719774530..775003 [+], 474120609415transposition helper protein 
3Aave_0720775000..776094 [+], 1095120609416integrase catalytic subunit 
4Aave_0721776117..776359 [+], 243120609417small multidrug resistance protein 
5Aave_0722776423..777367 [+], 945120609418LysR family transcriptional regulator 
6Aave_0723777364..777630 [+], 267120609419putative lipoprotein 
7Aave_0724777866..779872 [+], 2007120609420conjugal transfer coupling protein TraG  TraG
8Aave_0725779869..780345 [+], 477120609421CopG/DNA-binding domain-containing protein 
9Aave_0726780342..781391 [+], 1050120609422type II secretion system protein E  TrbB
10Aave_0727781388..781774 [+], 387120609423conjugal transfer protein TrbC  TrbC
11Aave_0728781771..782040 [+], 270120609424putative conjugal transfer TrbD transmembrane protein  TrbD
12Aave_0729782053..784503 [+], 2451120609425conjugal transfer ATPase TrbE  TrbE
13Aave_0730784500..785243 [+], 744120609426conjugal transfer protein TrbJ  TrbJ
14Aave_0731785256..785570 [+], 315120609427putative lipoprotein 
15Aave_0732785567..786958 [+], 1392120609428conjugal transfer protein TrbL  TrbL
16Aave_0733786988..787692 [+], 705120609429conjugal transfer protein TrbF  TrbF
17Aave_0734787689..788693 [+], 1005120609430conjugal transfer protein TrbG/VirB9/CagX  TrbG
18Aave_0735788696..789835 [+], 1140120609431conjugation TrbI family protein  TrbI
19Aave_0736789970..790215 [+], 246120609432hypothetical protein 
20Aave_0737790634..791257 [+], 624120609433cupin 2 domain-containing protein 
21Aave_0738791334..792800 [+], 1467120609434major facilitator superfamily transporter 
22Aave_0739792895..793182 [-], 288120609435hypothetical protein 
23Aave_0740793471..794166 [-], 696120609436hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICE(Tn4371)6036 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 0.543055556. [PudMed:19941653] in_silico
 
in_silico This literature contains bioinformatics investigation