SecReT4
T4SS ID261
StrainPolaromonas naphthalenivorans CJ2
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_008781
Location2630954..2648630; 2665222..2667751
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_008781
Region 1: 2630954..2648630
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Pnap_24892626320..2627306 [-], 987121605385oxidoreductase FAD-binding subunit 
2Pnap_24902627423..2628379 [+], 957121605386LysR family transcriptional regulator 
3Pnap_24912628931..2629539 [+], 609121605387hypothetical protein 
4Pnap_24922629576..2630334 [+], 759121605388hypothetical protein 
5Pnap_24932630331..2630942 [+], 612121605389hypothetical protein 
6Pnap_24942630954..2631538 [+], 585121605390lytic transglycosylase catalytic subunit  TrbN
7Pnap_24952631468..2632022 [-], 555121605391hypothetical protein 
8Pnap_24962632055..2632411 [-], 357121605392hypothetical protein 
9Pnap_24972632633..2633598 [+], 966121605393type II secretion system protein E  TrbB
10Pnap_24982633963..2634217 [+], 255121605394hypothetical protein 
11Pnap_24992634497..2635378 [+], 882121605395hypothetical protein 
12Pnap_25002635393..2635536 [-], 144121605396hypothetical protein 
13Pnap_25012635951..2636292 [+], 342121605397conjugal transfer protein TrbC  TrbC
14Pnap_25022636319..2636642 [+], 324121605398conjugal transfer TrbD family protein  TrbD
15Pnap_25032636646..2639090 [+], 2445121605399CagE, TrbE, VirB component of type IV transporter system  TrbE
16Pnap_25042639249..2639950 [+], 702121605400conjugal transfer protein TrbJ  TrbJ
17Pnap_25052639965..2641590 [+], 1626121605401Type IV secretory pathway TrbL components-like protein  TrbL
18Pnap_25062641600..2643099 [+], 1500121605402hypothetical protein 
19Pnap_25072643196..2644107 [-], 912121605403hypothetical protein 
20Pnap_25082644104..2645297 [-], 1194121605404hypothetical protein 
21Pnap_25092645366..2646019 [+], 654121605405conjugal transfer protein  TrbF
22Pnap_25102646379..2647161 [+], 783121605406conjugal transfer protein TrbG/VirB9/CagX  TrbG
23Pnap_25112647158..2648630 [+], 1473121605407conjugation TrbI family protein  TrbI
24Pnap_25122648780..2649514 [-], 735121605408cytochrome c biogenesis protein transmembrane subunit 
25Pnap_25132649527..2649907 [-], 381121605409thioredoxin domain-containing protein 
26Pnap_25142650031..2650564 [+], 534121605410hypothetical protein 
27Pnap_25152650603..2651211 [+], 609121605411TetR family transcriptional regulator 
28Pnap_25162651284..2651871 [+], 588121605412late embryogenesis abundant protein 
29Pnap_25172651981..2652427 [+], 447121605413hypothetical protein 
30Pnap_25182652625..2653311 [+], 687121605414hypothetical protein 
 
Region 2: 2665222..2667751
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Pnap_25252660462..2661322 [+], 861121605420hypothetical protein 
2Pnap_25262661429..2661728 [-], 300121605421hypothetical protein 
3Pnap_25272661836..2662453 [+], 618121605422hypothetical protein 
4Pnap_25282662475..2663851 [+], 1377121605423hypothetical protein 
5Pnap_25292664051..2665205 [+], 1155121605424hypothetical protein 
6Pnap_25302665222..2667207 [+], 1986121605425TRAG family protein  TraG
7Pnap_25312667227..2667751 [+], 525121605426conjugal transfer protein TraF  TraF
8Pnap_25322667794..2668369 [-], 576121605427hypothetical protein 
9Pnap_25332668994..2670973 [-], 1980121605428relaxase/mobilization nuclease family protein 
10Pnap_25342671629..2671898 [+], 270121605429hypothetical protein 
11Pnap_25352671898..2672176 [+], 279121605430hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_008781