SecReT4
T4SS ID264
StrainThiomonas intermedia K12
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_014153
Location2073993..2077041; 2098956..2115665
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number011122021
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_014153
Region 1: 2073993..2077041
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Tint_19302070680..2070988 [-], 309296136381relaxase/mobilization nuclease family protein 
2Tint_19312071038..2071298 [+], 261296136382transposase IS3/IS911 family protein 
3Tint_19322071360..2072268 [+], 909296136383integrase catalytic subunit 
4Tint_19332072317..2072718 [-], 402296136384mobilisation protein 
5Tint_19342073250..2073471 [-], 222296136385phage transcriptional regulator, AlpA 
6Tint_19352073993..2075402 [-], 1410296136386conjugation TrbI family protein  TrbI
7Tint_19362075412..2076380 [-], 969296136387conjugal transfer protein TrbG  TrbG
8Tint_19372076391..2077041 [-], 651296136388Conjugal transfer protein  TrbF
9Tint_19382077647..2081432 [-], 3786296136389hypothetical protein 
 
Region 2: 2098956..2115665
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Tint_19542094210..2094977 [-], 768296136404hypothetical protein 
2Tint_19552095083..2096024 [+], 942296136405AraC family transcriptional regulator 
3Tint_19562096053..2097300 [-], 1248296136406major facilitator superfamily protein 
4Tint_19572097451..2097816 [-], 366296136407endoribonuclease L-PSP 
5Tint_19582097947..2098768 [+], 822296136408TrmB family transcriptional regulator 
6Tint_19592098956..2100338 [-], 1383296136409conjugation TrbI family protein  TrbI
7Tint_19602100350..2101333 [-], 984296136410conjugal transfer protein TrbG  TrbG
8Tint_19612101330..2101602 [-], 273296136411hypothetical protein 
9Tint_19622101599..2102249 [-], 651296136412Conjugal transfer protein  TrbF
10Tint_19632102507..2102707 [+], 201296136413hypothetical protein 
11Tint_19642102762..2103130 [+], 369296136414XRE family transcriptional regulator 
12Tint_19652103319..2103585 [+], 267296136415hypothetical protein 
13Tint_19662103572..2103907 [+], 336296136416hypothetical protein 
14Tint_19672103949..2104191 [-], 243296136417hypothetical protein 
15Tint_19682104193..2105923 [-], 1731296136418P-type conjugative transfer protein TrbL  TrbL
16Tint_19692105933..2106631 [-], 699296136419P-type conjugative transfer protein TrbJ  TrbJ
17Tint_19702106653..2107459 [-], 807296136420cell wall surface anchor family protein 
18Tint_19712108039..2110489 [-], 2451296136421CagE, TrbE, VirB component of type IV transporter system  TrbE
19Tint_19722110486..2110785 [-], 300296136422Conjugal transfer TrbD family protein  TrbD
20Tint_19732110782..2110976 [-], 195296136423hypothetical protein 
21Tint_19742110979..2111332 [-], 354296136424conjugal transfer protein Trbc  TrbC
22Tint_19752111413..2111994 [-], 582296136425Peptidase S26, conserved region  TraF
23Tint_19762112061..2113419 [-], 1359296136426HipA N-terminal domain-containing protein 
24Tint_19772113397..2113693 [-], 297296136427XRE family transcriptional regulator 
25Tint_19782113734..2115665 [-], 1932296136428TRAG family protein  TraG
26Tint_19792115811..2118435 [-], 2625296136429hypothetical protein 
27Tint_19802118428..2118589 [-], 162296136430peptidase S9 prolyl oligopeptidase active site domain protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_014153