SecReT4
T4SS ID27
StrainNovosphingobium sp. PP1Y
Repliconplasmid Spl [Browse all T4SS(s) in this replicon]
AccessionNC_015582
Location27905..40737
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_015582
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PP1Y_Spl24924058..24627 [+], 570334143070resolvase domain-containing protein 
2PP1Y_Spl25524651..26396 [+], 1746334143071KWG repeat-containing protein 
3PP1Y_Spl27026487..26600 [-], 114334143072hypothetical protein 
4PP1Y_Spl27426670..27641 [-], 972334143073hypothetical protein 
5PP1Y_Spl28727905..29638 [-], 1734334143074type IV secretion system protein VirD4  VirD4
6PP1Y_Spl30529804..30820 [-], 1017334143075type IV secretion system protein VirB11  VirB11
7PP1Y_Spl31430824..32095 [-], 1272334143076type IV secretion system protein VirB10  VirB10
8PP1Y_Spl33032097..33104 [-], 1008334143077type IV secretion system protein VirB9  VirB9
9PP1Y_Spl33733106..33783 [-], 678334143078type IV secretion system protein VirB8  VirB8
10PP1Y_Spl34734193..35221 [-], 1029334143079type IV secretion system protein VirB6  VirB6
11PP1Y_Spl35735255..35512 [-], 258334143080hypothetical protein 
12PP1Y_Spl36035509..36189 [-], 681334143081type IV secretion system protein VirB5  VirB5
13PP1Y_Spl36736230..38596 [-], 2367334143082type IV secretion system protein VirB4  VirB4
14PP1Y_Spl38538589..38927 [-], 339334143083type IV secretion system protein VirB3  VirB3
15PP1Y_Spl38938929..39093 [-], 165334143084hypothetical protein  VirB2
16PP1Y_Spl39239269..40135 [-], 867334143085hypothetical protein 
17PP1Y_Spl40340132..40737 [-], 606334143086type IV secretion system protein VirB1  VirB1
18PP1Y_Spl41240734..41102 [-], 369334143087hypothetical protein 
19PP1Y_Spl42141425..41868 [+], 444334143088DNA resolvase 
20PP1Y_Spl43042076..42684 [-], 609334143089YecA family protein 
21PP1Y_Spl43842713..43186 [-], 474334143090hypothetical protein 
22PP1Y_Spl44243238..43795 [-], 558334143091LuxR family transcriptional regulator 
23PP1Y_Spl44943904..44155 [-], 252334143092XRE family transcriptional regulator 
24PP1Y_Spl45444274..44756 [+], 483334143093hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_015582