SecReT4
T4SS ID278
StrainGluconacetobacter diazotrophicus PAl 5
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010125
Location136645..148414
NameTrb
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01001

The information of T4SS components from NC_010125
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1GDI_0125133335..134486 [-], 1152162145959hypothetical protein 
2GDI_0126134663..135796 [+], 1134162145960hypothetical protein 
3GDI_0127136272..136562 [-], 291162145961hypothetical protein 
4GDI_0128 (traG)136645..138714 [+], 2070162145962conjugal transfer coupling protein TraG  TraG
5GDI_0129138722..139153 [+], 432162145963hypothetical protein 
6GDI_0130 (trbB)139301..140305 [+], 1005162145964type IV secretion system protein  TrbB
7GDI_0131 (trbC)140302..140670 [+], 369162145965conjugal transfer protein trbC  TrbC
8GDI_0132 (trbD)140670..140945 [+], 276162145966conjugal transfer protein trbD  TrbD
9GDI_0133 (trbE)140959..143400 [+], 2442162145967conjugal transfer ATPase TrbE  TrbE
10GDI_0134 (trbJ)143397..144134 [+], 738162145968conjugal transfer protein TrbJ  TrbJ
11GDI_0135 (trbL)144140..145561 [+], 1422162145969conjugal transfer protein TrbL  TrbL
12GDI_0136 (trbF)145561..146244 [+], 684162145970conjugal transfer protein TrbF  TrbF
13GDI_0137 (trbG)146241..147242 [+], 1002162145971type IV secretion system protein  TrbG
14GDI_0138 (trbI)147239..148414 [+], 1176162145972type IV secretion system protein  TrbI
15GDI_0139148647..149372 [-], 726162145973LysR family transcriptional regulator 
16GDI_0140149527..149793 [+], 267162145974transposase 
17GDI_0141149817..150644 [+], 828162145975transposase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Bertalan M; Albano R; de Padua V; Rouws L; Rojas C; Hemerly A; Teixeira K; Schwab S; Araujo J; Oliveira A; Franca L; Magalhaes V; Alqueres S; Cardoso A; Almeida W; Loureiro MM; Nogueira E; Cidade D; Oliveira D; Simao T; Macedo J; Valadao A; Dreschsel M; Freitas F; Vidal M; Guedes H; Rodrigues E; Meneses C; Brioso P; Pozzer L; Figueiredo D; Montano H; Junior J; de Souza Filho G; Martin Quintana Flores V; Ferreira B; Branco A; Gonzalez P; Guillobel H; Lemos M; Seibel L; Macedo J; Alves-Ferreira M; Sachetto-Martins G; Coelho A; Santos E; Amaral G; Neves A; Pacheco AB; Carvalho D; Lery L; Bisch P; Rossle SC; Urmenyi T; Rael Pereira A; Silva R; Rondinelli E; von Kruger W; Martins O; Baldani JI; Ferreira PC (2009). Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5. BMC Genomics. 0.729166667. [PudMed:19775431]