SecReT4
T4SS ID279
StrainGluconacetobacter diazotrophicus PAl 5
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010125
Location1025592..1039316
NameTrb
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01001

The information of T4SS components from NC_010125
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1GDI_10061021071..1021862 [+], 792162146824NAD(P)H oxidoreductase 
2GDI_10071021979..1022740 [+], 762162146825LysR family transcriptional regulator 
3GDI_10081022770..1023795 [-], 1026162146826integrase 
4GDI_1009 (apbA)1024290..1025183 [+], 8941621468272-dehydropantoate 2-reductase 
5GDI_10101025350..1025595 [-], 246162146828hypothetical protein 
6GDI_1011 (trbI)1025592..1026752 [-], 1161162146829conjugation TrbI-like protein  TrbI
7GDI_1012 (trbG)1026749..1027735 [-], 987162146830conjugal transfer protein trbG  TrbG
8GDI_1013 (trbF)1027735..1028415 [-], 681162146831conjugal transfer protein TrbF  TrbF
9GDI_1014 (trbL)1028418..1029677 [-], 1260162146832conjugal transfer protein TrbL  TrbL
10GDI_1015 (trbJ)1029954..1030700 [-], 747162146833conjugal transfer protein TrbJ  TrbJ
11GDI_1016 (trbE)1030697..1033123 [-], 2427162146834conjugal transfer ATPase TrbE  TrbE
12GDI_1017 (trbD)1033131..1033397 [-], 267162146835conjugal transfer protein; TrbD  TrbD
13GDI_1018 (trbC)1033397..1033714 [-], 318162146836conjugal transfer protein TrbC  TrbC
14GDI_1019 (trbB)1033720..1034688 [-], 969162146837type II/IV secretion system protein trbB  TrbB
15GDI_10201034903..1035172 [+], 270162146838DNA-binding protein HU-beta 
16GDI_10211035329..1036783 [+], 1455162146839hypothetical protein 
17GDI_10221036903..1037328 [-], 426162146840hypothetical protein 
18GDI_1023 (traG)1037334..1039316 [-], 1983162146841conjugal transfer coupling protein TraG  TraG
19GDI_10241039474..1039764 [-], 291162146842hypothetical protein 
20GDI_10251039757..1040029 [-], 273162146843hypothetical protein 
21GDI_10261040085..1040357 [-], 273162146844transcriptional regulator protein 
22GDI_10271040448..1042202 [-], 1755162146845hypothetical protein 
23GDI_10281042476..1042922 [+], 447162146846hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Bertalan M; Albano R; de Padua V; Rouws L; Rojas C; Hemerly A; Teixeira K; Schwab S; Araujo J; Oliveira A; Franca L; Magalhaes V; Alqueres S; Cardoso A; Almeida W; Loureiro MM; Nogueira E; Cidade D; Oliveira D; Simao T; Macedo J; Valadao A; Dreschsel M; Freitas F; Vidal M; Guedes H; Rodrigues E; Meneses C; Brioso P; Pozzer L; Figueiredo D; Montano H; Junior J; de Souza Filho G; Martin Quintana Flores V; Ferreira B; Branco A; Gonzalez P; Guillobel H; Lemos M; Seibel L; Macedo J; Alves-Ferreira M; Sachetto-Martins G; Coelho A; Santos E; Amaral G; Neves A; Pacheco AB; Carvalho D; Lery L; Bisch P; Rossle SC; Urmenyi T; Rael Pereira A; Silva R; Rondinelli E; von Kruger W; Martins O; Baldani JI; Ferreira PC (2009). Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5. BMC Genomics. 0.729166667. [PudMed:19775431]