SecReT4
T4SS ID28
StrainSphingobium japonicum UT26S
Repliconchromosome 1 [Browse all T4SS(s) in this replicon]
AccessionNC_014006
Location465718..477446
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_014006
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SJA_C1-04510461287..461967 [+], 681294010437putative protease 
2SJA_C1-04520461939..462718 [+], 780294010438hypothetical protein 
3SJA_C1-04530462685..463389 [-], 705294010439hypothetical protein 
4SJA_C1-04540463386..464564 [-], 1179294010440hypothetical protein 
5SJA_C1-04550464564..464698 [-], 135294010441hypothetical protein 
6SJA_C1-04560 (traO)464859..465728 [-], 870294010442DNA transfer TraO-like protein 
7SJA_C1-04570 (virD4)465718..467682 [-], 1965294010443type IV secretory pathway VirD4 component  VirD4
8SJA_C1-04580 (virB11)467666..468670 [-], 1005294010444type IV secretory pathway VirB11 component  VirB11
9SJA_C1-04590 (virB10)468674..469900 [-], 1227294010445type IV secretory pathway VirB10 component  VirB10
10SJA_C1-04600 (virB9)469904..470761 [-], 858294010446type IV secretory pathway VirB9 component  VirB9
11SJA_C1-04610 (virB8)470758..471456 [-], 699294010447type IV secretory pathway VirB8 component  VirB8
12SJA_C1-04620471443..471784 [-], 342294010448hypothetical protein 
13SJA_C1-04630 (virB6)471797..472741 [-], 945294010449type IV secretory pathway VirB6 component  VirB6
14SJA_C1-04640 (virB5)472978..473691 [-], 714294010450type IV secretory pathway VirB5 component  VirB5
15SJA_C1-04650 (virB4)473695..476112 [-], 2418294010451type IV secretory pathway VirB4 component  VirB4
16SJA_C1-04660 (virB3)476099..476449 [-], 351294010452type IV secretory pathway VirB3 component  VirB3
17SJA_C1-04670 (virB2)476446..476784 [-], 339294010453type IV secretory pathway VirB2 component  VirB2
18SJA_C1-04680 (virB1)476781..477446 [-], 666294010454type IV secretion system protein VirB1  VirB1
19SJA_C1-04690477443..477781 [-], 339294010455hypothetical protein 
20SJA_C1-04700477845..478777 [-], 933294010456hypothetical protein 
21SJA_C1-04710 (luxI)478789..479400 [-], 612294010457N-acyl-L-homoserine lactone synthetase 
22SJA_C1-04720 (luxR)479475..480221 [-], 747294010458LuxR-family transcriptional regulator 
23SJA_C1-04730 (luxR)480235..480996 [-], 762294010459LuxR-family transcriptional regulator 
24SJA_C1-04740481218..481787 [+], 570294010460hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_014006