SecReT4
T4SS ID280
StrainGluconacetobacter diazotrophicus PAl 5
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010125
Location2829722..2843640
NameTrb
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number00001

The information of T4SS components from NC_010125
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1GDI_27312825344..2826921 [+], 1578162148509hypothetical protein 
2GDI_2732 (mhpD)2826918..2827715 [+], 7981621485102-keto-4-pentenoate hydratase 
3GDI_27332827700..2828578 [+], 879162148511transcriptional regulator 
4GDI_27342828575..2829489 [+], 915162148512LysR family transcriptional regulator 
5GDI_27352829492..2829725 [-], 234162148513transposase 
6GDI_2736 (trbI)2829722..2830894 [-], 1173162148514conjugation TrbI-like protein  TrbI
7GDI_27372830891..2831892 [-], 1002162148515type IV secretion system  TrbG
8GDI_2738 (trbF)2831889..2832575 [-], 687162148516conjugal transfer protein TrbF  TrbF
9GDI_27392832907..2833335 [+], 429162148517trabsposase 
10GDI_2741 (trbJ)2834026..2834760 [-], 735162148518conjugal transfer protein TrbJ  TrbJ
11GDI_2742 (trbE)2834802..2837234 [-], 2433162148519conjugal transfer ATPase TrbE  TrbE
12GDI_2743 (trbD)2837247..2837525 [-], 279162148520conjugal transfer protein trbD  TrbD
13GDI_2744 (trbC)2837525..2837857 [-], 333162148521conjugal transfer protein trbC  TrbC
14GDI_27452837854..2838783 [-], 930162148522type II/IV secretion system protein  TrbB
15GDI_27462839014..2839934 [-], 921162148523AraC family transcriptional regulator 
16GDI_27472839937..2841169 [+], 1233162148524aldo/keto reductase 
17GDI_27482841204..2841635 [-], 432162148525hypothetical protein 
18GDI_2749 (traG)2841640..2843640 [-], 2001162148526conjugal transfer coupling protein TraG  TraG
19GDI_27502843858..2844469 [-], 612162148527hypothetical protein 
20GDI_27512844471..2845097 [+], 627162148528hypothetical protein 
21GDI_27522845145..2845555 [+], 411162148529hypothetical protein 
22GDI_27532845593..2847332 [-], 1740162148530hypothetical protein 
23GDI_27552848245..2848622 [+], 378162148531transposase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Bertalan M; Albano R; de Padua V; Rouws L; Rojas C; Hemerly A; Teixeira K; Schwab S; Araujo J; Oliveira A; Franca L; Magalhaes V; Alqueres S; Cardoso A; Almeida W; Loureiro MM; Nogueira E; Cidade D; Oliveira D; Simao T; Macedo J; Valadao A; Dreschsel M; Freitas F; Vidal M; Guedes H; Rodrigues E; Meneses C; Brioso P; Pozzer L; Figueiredo D; Montano H; Junior J; de Souza Filho G; Martin Quintana Flores V; Ferreira B; Branco A; Gonzalez P; Guillobel H; Lemos M; Seibel L; Macedo J; Alves-Ferreira M; Sachetto-Martins G; Coelho A; Santos E; Amaral G; Neves A; Pacheco AB; Carvalho D; Lery L; Bisch P; Rossle SC; Urmenyi T; Rael Pereira A; Silva R; Rondinelli E; von Kruger W; Martins O; Baldani JI; Ferreira PC (2009). Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5. BMC Genomics. 0.729166667. [PudMed:19775431]