SecReT4
T4SS ID281
StrainGluconacetobacter diazotrophicus PAl 5
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010125
Location2990338..3003316
NameTrb
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01001

The information of T4SS components from NC_010125
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1GDI_29002986285..2986482 [-], 198162148673hypothetical protein 
2GDI_29012986506..2986982 [-], 477162148674hypothetical protein 
3GDI_29022986990..2987583 [-], 594162148675hypothetical protein 
4GDI_29042988359..2989351 [-], 993162148676integrase 
5GDI_29052990082..2990345 [-], 264162148677hypothetical protein 
6GDI_2906 (trbI)2990338..2991474 [-], 1137162148678conjugal transfer protein trbI  TrbI
7GDI_2907 (cagX)2991582..2992589 [-], 1008162148679conjugal transfer protein  TrbG
8GDI_2908 (trbF)2992586..2993278 [-], 693162148680conjugal transfer protein TrbF  TrbF
9GDI_2909 (trbL)2993275..2994741 [-], 1467162148681conjugal transfer protein TrbL  TrbL
10GDI_2910 (trbJ)2994745..2995455 [-], 711162148682conjugal transfer protein TrbJ  TrbJ
11GDI_2911 (trbE)2995542..2997977 [-], 2436162148683conjugal transfer ATPase TrbE  TrbE
12GDI_2912 (trbD)2997991..2998266 [-], 276162148684conjugal transfer protein trbD  TrbD
13GDI_2913 (trbC)2998266..2998622 [-], 357162148685conjugal transfer protein trbC  TrbC
14GDI_2914 (trbB)2998619..2999674 [-], 1056162148686conjugal transfer protein trbB  TrbB
15GDI_29153000038..3000814 [+], 777162148687mucR family transcriptional regulatory protein 
16GDI_29163000849..3001298 [-], 450162148688hypothetical protein 
17GDI_2917 (traG)3001295..3003316 [-], 2022162148689conjugal transfer coupling protein TraG  TraG
18GDI_2918 (tetR)3003488..3004108 [-], 621162148690transcription regulator tetR 
19GDI_29193004324..3005157 [-], 834162148691hypothetical protein 
20GDI_29203005179..3005457 [+], 279162148692hypothetical protein 
21GDI_29213005649..3006095 [+], 447162148693hypothetical protein 
22GDI_29223006108..3007769 [+], 1662162148694DNA recombinase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Bertalan M; Albano R; de Padua V; Rouws L; Rojas C; Hemerly A; Teixeira K; Schwab S; Araujo J; Oliveira A; Franca L; Magalhaes V; Alqueres S; Cardoso A; Almeida W; Loureiro MM; Nogueira E; Cidade D; Oliveira D; Simao T; Macedo J; Valadao A; Dreschsel M; Freitas F; Vidal M; Guedes H; Rodrigues E; Meneses C; Brioso P; Pozzer L; Figueiredo D; Montano H; Junior J; de Souza Filho G; Martin Quintana Flores V; Ferreira B; Branco A; Gonzalez P; Guillobel H; Lemos M; Seibel L; Macedo J; Alves-Ferreira M; Sachetto-Martins G; Coelho A; Santos E; Amaral G; Neves A; Pacheco AB; Carvalho D; Lery L; Bisch P; Rossle SC; Urmenyi T; Rael Pereira A; Silva R; Rondinelli E; von Kruger W; Martins O; Baldani JI; Ferreira PC (2009). Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5. BMC Genomics. 0.729166667. [PudMed:19775431]