SecReT4
T4SS ID285
StrainStenotrophomonas maltophilia K279a
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010943
Location1324734..1348631
NameTrb
Functionconjugation
ClassificationType IVA; Type P
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_010943
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Smlt1278 (rplU)1322082..1322390 [+], 30919057329650S ribosomal protein L21 
2Smlt1279 (rpmA)1322409..1322672 [+], 26419057329750S ribosomal protein L27 
3Smlt1280 (obgE)1322866..1323918 [+], 1053190573298GTPase ObgE 
4Smlt12821324492..1324737 [-], 246190573299hypothetical protein 
5Smlt1283 (trbI)1324734..1325993 [-], 1260190573300conjugal transfer protein  TrbI
6Smlt1284 (trbG)1325996..1326982 [-], 987190573301conjugal transfer protein  TrbG
7Smlt1285 (trbF)1326979..1327683 [-], 705190573302conjugal transfer protein TrbF  TrbF
8Smlt1286 (trbL)1327702..1329000 [-], 1299190573303conjugal transfer protein TrbL  TrbL
9Smlt1287 (trbJ)1329012..1329749 [-], 738190573304conjugal transfer protein TrbJ  TrbJ
10Smlt1288 (trbE)1329746..1332232 [-], 2487190573305conjugal transfer ATPase TrbE  TrbE
11Smlt1289 (trbD)1332243..1332515 [-], 273190573306conjugal transfer protein  TrbD
12Smlt1290 (trbC)1332512..1332895 [-], 384190573307conjugal transfer protein  TrbC
13Smlt1291 (trbB)1332892..1333932 [-], 1041190573308conjugal transfer protein  TrbB
14Smlt12921333929..1334375 [-], 447190573309hypothetical protein 
15Smlt1293 (traG)1334372..1336372 [-], 2001190573310conjugal transfer coupling protein TraG  TraG
16Smlt12941336606..1336866 [-], 261190573311hypothetical protein 
17Smlt12951336911..1337804 [-], 894190573312LysR family transcriptional regulator 
18Smlt12981338123..1338425 [-], 303190573313hypothetical protein 
19Smlt12991338412..1339266 [-], 855190573314NAD(P)H dehydrogenase 
20Smlt13001339362..1340264 [+], 903190573315LysR family transcriptional regulator 
21Smlt13011340359..1340619 [-], 261190573316hypothetical protein 
22Smlt13021340656..1341549 [-], 894190573317LysR family transcriptional regulator 
23Smlt13031341582..1342424 [-], 843190573318hypothetical protein 
24Smlt13041342421..1342804 [-], 3841905733194-carboxymuconolactone decarboxylase 
25Smlt13051342737..1343207 [-], 471190573320MerR family transcriptional regulator 
26Smlt13061343295..1344665 [-], 1371190573321MFS family transmembrane transporter 
27Smlt13071344784..1345635 [+], 852190573322LysR family transcriptional regulator 
28Smlt13081345632..1347596 [-], 1965190573323hypothetical protein 
29Smlt13091347593..1348030 [-], 438190573324hypothetical protein 
30Smlt13101348056..1348631 [-], 576190573325transmembrane anchor conjugal transfer protein  TraF
31Smlt13111348628..1349152 [-], 525190573326hypothetical protein 
32Smlt13121349149..1349412 [-], 264190573327parB partition protein 
33Smlt13131349409..1350047 [-], 639190573328ParA/CobQ/CobB/MinD nucleotide binding domain-containing protein 
34Smlt13141350298..1351131 [-], 834190573329RepA-like replication protein 
35Smlt13151351158..1351448 [-], 291190573330hypothetical protein 
36Smlt13161351532..1352335 [-], 804190573331hypothetical protein 
37Smlt13181352687..1353037 [-], 351190573332hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICE(Tn4371)6068 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 0.543055556. [PudMed:19941653] in_silico
 
in_silico This literature contains bioinformatics investigation