SecReT4
T4SS ID29
StrainSphingomonas wittichii RW1
Repliconplasmid pSWIT02 [Browse all T4SS(s) in this replicon]
AccessionNC_009508
Location116346..128096
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_009508
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Swit_4997113573..114316 [-], 744148550950hypothetical protein 
2Swit_4998114316..115146 [-], 831148550951transcriptional regulator-like protein 
3Swit_4999115400..116365 [-], 966148550952hypothetical protein 
4Swit_5000116346..118358 [-], 2013148550953TRAG family protein  VirD4
5Swit_5001118324..119328 [-], 1005148550954P-type DNA transfer ATPase VirB11  VirB11
6Swit_5002119332..120549 [-], 1218148550955conjugation TrbI family protein  VirB10
7Swit_5003120555..121412 [-], 858148550956P-type conjugative transfer protein VirB9  VirB9
8Swit_5004121409..122098 [-], 690148550957VirB8 family protein  VirB8
9Swit_5005122433..123377 [-], 945148550958TrbL/VirB6 plasmid conjugal transfer protein  VirB6
10Swit_5006123607..124323 [-], 717148550959type IV secretion system family protein  VirB5
11Swit_5007124328..126745 [-], 2418148550960type IV secretion/conjugal transfer ATPase  VirB4
12Swit_5008126738..127073 [-], 336148550961type IV secretory pathway, VirB3 family protein  VirB3
13Swit_5009127084..127425 [-], 342148550962VIRB2 type IV secretion fmaily protein  VirB2
14Swit_5010127422..128096 [-], 675148550963lytic transglycosylase, catalytic  VirB1
15Swit_5012128698..129567 [-], 870148550964regulatory protein, LuxR 
16Swit_5013129719..130285 [+], 567148550965hypothetical protein 
17Swit_5015132216..132587 [-], 372148550966IS4 family transposase 
18Swit_5016132599..132973 [-], 375148550967hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_009508