SecReT4
T4SS ID292
StrainCupriavidus necator N-1
Repliconplasmid BB1p [Browse all T4SS(s) in this replicon]
AccessionNC_015727
Location497786..507323; 1435062..1435637
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01010

The information of T4SS components from NC_015727
Region 1: 497786..507323
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1CNE_BB1p04780493800..493967 [-], 168339328248hypothetical protein 
2CNE_BB1p04790494134..495501 [+], 1368339328249hypothetical protein 
3CNE_BB1p04800495821..495928 [+], 108339328250hypothetical protein 
4CNE_BB1p04810496237..497325 [+], 1089339328251transposase 
5CNE_BB1p04820497478..497789 [-], 312339328252hypothetical protein 
6CNE_BB1p04830 (trbI)497786..499063 [-], 1278339328253conjugal transfer protein TrbI  TrbI
7CNE_BB1p04840 (trbG)499066..500058 [-], 993339328254conjugal transfer protein TrbG  TrbG
8CNE_BB1p04850 (trbF)500055..500759 [-], 705339328255conjugal transfer protein TrbF  TrbF
9CNE_BB1p04860 (trbL)500790..502163 [-], 1374339328256conjugal transfer transmembrane protein TrbL  TrbL
10CNE_BB1p04870 (trbJ)502160..503248 [-], 1089339328257conjugal transfer TrbJ signal peptide protein TrbJ  TrbJ
11CNE_BB1p04880 (trbE)503245..505131 [-], 1887339328258conjugal transfer protein TrbE  TrbE
12CNE_BB1p04890 (trbD)505144..505416 [-], 273339328259conjugal transfer transmembrane protein TrbD  TrbD
13CNE_BB1p04900 (trbC)505413..505796 [-], 384339328260conjugal transfer protein TrbC  TrbC
14CNE_BB1p04910 (trbB)505961..506212 [-], 252339328261conjugal transfer protein Trbb  TrbB
15CNE_BB1p04920506250..507323 [-], 1074339328262hypothetical protein 
16CNE_BB1p04950509559..509813 [-], 255339328263lipoprotein 
17CNE_BB1p04960510055..511134 [-], 1080339328264integrase 
18CNE_BB1p04970511110..511607 [-], 498339328265transposase IS3 family 
 
Region 2: 1435062..1435637
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1CNE_BB1p136601430471..1431745 [-], 1275339329111hypothetical protein 
2CNE_BB1p13690 (traF)1435062..1435637 [-], 576339329112conjugal transfer protein Traf  TraF
3CNE_BB1p137001435634..1436167 [-], 534339329113hypothetical protein 
4CNE_BB1p13710 (tnpA4)1436236..1437657 [+], 1422339329114transposase for transposon Tn5 
5CNE_BB1p137201437819..1438841 [+], 1023339329115transposase IS116/IS110/IS902 family protein 
6CNE_BB1p13730 (parG)1439124..1439375 [-], 252339329116plasmid copy number transcriptional regulator parG 
7CNE_BB1p13740 (parA2)1439372..1440010 [-], 639339329117ATPase involved in plasmid partitioning 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_015727