SecReT4
T4SS ID293
StrainSphingobium japonicum UT26S
Repliconplasmid pCHQ1 [Browse all T4SS(s) in this replicon]
AccessionNC_014007
Location137976..153862
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number11111

The information of T4SS components from NC_014007
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SJA_P1-01640133278..134429 [+], 1152294023820HlyD-family secretion protein 
2SJA_P1-01650134431..135966 [+], 1536294023821putative multidrug resistance protein 
3SJA_P1-01660136056..136730 [+], 675294023822TetR family transcriptional regulator 
4SJA_P1-01670136796..137725 [+], 930294023823LysR family transcriptional regulator 
5SJA_P1-01680137722..137973 [-], 252294023824hypothetical protein 
6SJA_P1-01690 (trbI)137976..139202 [-], 1227294023825conjugal transfer protein TrbI  TrbI
7SJA_P1-01700 (trbG)139199..140248 [-], 1050294023826conjugal transfer protein TrbG  TrbG
8SJA_P1-01710 (trbF)140245..140928 [-], 684294023827conjugal transfer protein TrbF  TrbF
9SJA_P1-01720 (trbL)140928..142286 [-], 1359294023828conjugal transfer protein TrbL  TrbL
10SJA_P1-01730 (trbK)142289..142624 [-], 336294023829conjugal transfer protein TrbK  TrbK
11SJA_P1-01740 (trbJ)142635..143399 [-], 765294023830conjugal transfer protein TrbJ  TrbJ
12SJA_P1-01750 (trbE)143396..145834 [-], 2439294023831conjugal transfer protein TrbE  TrbE
13SJA_P1-01760 (trbD)145845..146126 [-], 282294023832conjugal transfer protein TrbD  TrbD
14SJA_P1-01770 (trbC)146126..146458 [-], 333294023833conjugal transfer protein TrbC  TrbC
15SJA_P1-01780 (trbB)146455..147438 [-], 984294023834conjugal transfer protein TrbB  TrbB
16SJA_P1-01790147698..148132 [-], 435294023835CopG-family protein 
17SJA_P1-01800 (traG)148142..150145 [-], 2004294023836conjugal transfer protein TraG  TraG
18SJA_P1-01810 (traI)150171..151910 [-], 1740294023837conjugal transfer protein TraI 
19SJA_P1-01820152155..152919 [-], 765294023838putative transglycosylase  TrbN
20SJA_P1-01830152923..153270 [-], 348294023839hypothetical protein 
21SJA_P1-01840 (traF)153317..153862 [-], 546294023840conjugal transfer protein TraF  TraF
22SJA_P1-01850153859..154377 [-], 519294023841hypothetical protein 
23SJA_P1-01860154374..154628 [-], 255294023842hypothetical protein 
24SJA_P1-01870154625..155263 [-], 639294023843ParA-like protein 
25SJA_P1-01880 (repA)155472..156359 [-], 888294023844replication protein A 
26SJA_P1-01890156371..156646 [-], 276294023845putative phage transcriptional regulator AlpA 
27SJA_P1-01900156774..157280 [-], 507294023846hypothetical protein 
28SJA_P1-01910157660..157941 [-], 282294023847hypothetical protein 
29SJA_P1-01920158045..158287 [-], 243294023848XRE family transcriptional regulator 
30SJA_P1-01930158474..158800 [-], 327294023849hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_014007