SecReT4
T4SS ID294
StrainSphingomonas wittichii RW1
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_009511
Location154172..173403
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_009511
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Swit_0155150539..150928 [+], 390148553082hypothetical protein 
2Swit_0156150906..151238 [+], 333148553083XRE family transcriptional regulator 
3Swit_0157151314..151709 [-], 396148553084hypothetical protein 
4Swit_0158151817..152434 [-], 618148553085hypothetical protein 
5Swit_0159152453..153385 [-], 933148553086hypothetical protein 
6Swit_0160153521..154114 [-], 594148553087hypothetical protein 
7Swit_0161154172..155143 [+], 972148553088P-type conjugative transfer ATPase TrbB  TrbB
8Swit_0162155140..155454 [+], 315148553089conjugal transfer protein TrbC  TrbC
9Swit_0163155454..155720 [+], 267148553090Type IV secretory pathway TrbD component-like protein  TrbD
10Swit_0164155727..158195 [+], 2469148553091conjugal transfer ATPase TrbE  TrbE
11Swit_0165158192..158926 [+], 735148553092conjugal transfer protein TrbJ  TrbJ
12Swit_0166158919..159284 [+], 366148553093hypothetical protein 
13Swit_0167159290..160606 [+], 1317148553094conjugal transfer protein TrbL  TrbL
14Swit_0168160603..161292 [+], 690148553095conjugal transfer protein TrbF  TrbF
15Swit_0169161296..162132 [+], 837148553096P-type conjugative transfer protein TrbG  TrbG
16Swit_0170162132..163319 [+], 1188148553097conjugation TrbI family protein  TrbI
17Swit_0171163326..163589 [-], 264148553098hypothetical protein 
18Swit_0172163608..163835 [+], 228148553099XRE family transcriptional regulator 
19Swit_0173163859..164815 [-], 957148553100LysR family transcriptional regulator 
20Swit_0174165032..165517 [-], 486148553101hypothetical protein 
21Swit_0175165609..166373 [-], 765148553102LuxR family transcriptional regulator 
22Swit_0176166438..167058 [-], 621148553103ECF subfamily RNA polymerase sigma-24 factor 
23Swit_0177167308..169044 [-], 1737148553104Type IV secretory pathway VirD4 components-like protein  TraG
24Swit_0178169044..171488 [-], 2445148553105conjugal transfer relaxase TraA 
25Swit_0179171641..171967 [+], 327148553106hypothetical protein 
26Swit_0180171984..172247 [+], 264148553107conjugal transfer TraD family protein 
27Swit_0181172259..172963 [-], 705148553108lytic transglycosylase subunit  TrbN
28Swit_0182172960..173403 [-], 444148553109Type IV secretory pathway protease TraF-like protein  TraF
29Swit_0183173517..174275 [-], 759148553110hypothetical protein 
30Swit_0184174539..174802 [-], 264148553111hypothetical protein 
31Swit_0185175047..175598 [-], 552148553112hypothetical protein 
32Swit_0186176196..177875 [+], 1680148553113recombinase 
33Swit_0187177968..178366 [-], 399148553114hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_009511