SecReT4
T4SS ID295
StrainSphingomonas wittichii RW1
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_009511
Location4048425..4064357
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number11111

The information of T4SS components from NC_009511
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Swit_36784043667..4044512 [+], 846148556580hypothetical protein 
2Swit_36794044758..4045009 [+], 252148556581hypothetical protein 
3Swit_36804045149..4045412 [+], 264148556582hypothetical protein 
4Swit_36814045572..4046348 [+], 777148556583hypothetical protein 
5Swit_36824046469..4046735 [+], 267148556584hypothetical protein 
6Swit_36834046742..4047635 [+], 894148556585plasmid replication initiator-like protein 
7Swit_36844047907..4048428 [+], 522148556586hypothetical protein 
8Swit_36854048425..4049003 [+], 579148556587Type IV secretory pathway protease TraF-like protein  TraF
9Swit_36864048984..4049316 [+], 333148556588hypothetical protein 
10Swit_36874049320..4050222 [+], 903148556589lytic transglycosylase subunit  TrbN
11Swit_36884050401..4052212 [+], 1812148556590Type IV secretory pathway VirD2 components (relaxase)-like protein 
12Swit_36894052392..4054422 [+], 2031148556591conjugal transfer coupling protein TraG  TraG
13Swit_36904054419..4054838 [+], 420148556592hypothetical protein 
14Swit_36914054979..4055965 [+], 987148556593P-type conjugative transfer ATPase TrbB  TrbB
15Swit_36924055962..4056297 [+], 336148556594conjugal transfer protein TrbC  TrbC
16Swit_36934056294..4056575 [+], 282148556595type IV secretory pathway, VirB3 family protein  TrbD
17Swit_36944056572..4059034 [+], 2463148556596conjugal transfer ATPase TrbE  TrbE
18Swit_36954059031..4059747 [+], 717148556597conjugal transfer protein TrbJ  TrbJ
19Swit_36964059756..4060058 [+], 303148556598hypothetical protein  TrbK
20Swit_36974060055..4061440 [+], 1386148556599conjugal transfer protein TrbL  TrbL
21Swit_36984061447..4062130 [+], 684148556600conjugal transfer protein TrbF  TrbF
22Swit_36994062127..4063143 [+], 1017148556601P-type conjugative transfer protein TrbG  TrbG
23Swit_37004063140..4064357 [+], 1218148556602conjugation TrbI family protein  TrbI
24Swit_37014064354..4064575 [+], 222148556603hypothetical protein 
25Swit_37024064593..4064901 [-], 309148556604hypothetical protein 
26Swit_37034064898..4065845 [-], 948148556605LysR family transcriptional regulator 
27Swit_37044066170..4066778 [+], 609148556606TetR family transcriptional regulator 
28Swit_37054066775..4067806 [+], 1032148556607hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_009511