SecReT4
T4SS ID303
StrainBurkholderia ambifaria AMMD
Repliconchromosome 1 [Browse all T4SS(s) in this replicon]
AccessionNC_008390
Location2183996..2210286
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_008390
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Bamb_19832180256..2181074 [+], 819115352034hypothetical protein 
2Bamb_19842181149..2181433 [+], 285115352035hypothetical protein 
3Bamb_19852181460..2182293 [+], 834115352036putative replication initiator and transcription repressor protein 
4Bamb_19862182559..2183197 [+], 639115352037cobyrinic acid a,c-diamide synthase 
5Bamb_19872183460..2183999 [+], 540115352038hypothetical protein 
6Bamb_19882183996..2184583 [+], 588115352039Type IV secretory pathway protease TraF-like protein  TraF
7Bamb_19892185032..2187035 [+], 2004115352040hypothetical protein 
8Bamb_19902187066..2187962 [-], 897115352041LysR family transcriptional regulator 
9Bamb_19912188121..2188681 [+], 561115352042hypothetical protein 
10Bamb_19922188674..2189000 [+], 327115352043hypothetical protein 
11Bamb_19932189022..2189861 [+], 840115352044beta-lactamase domain-containing protein 
12Bamb_19942189907..2190824 [-], 918115352045LysR family transcriptional regulator 
13Bamb_19952190971..2191675 [+], 705115352046ThiJ/PfpI domain-containing protein 
14Bamb_19962191679..2192872 [+], 1194115352047major facilitator transporter 
15Bamb_19972193645..2193896 [+], 252115352048hypothetical protein 
16Bamb_19982193969..2194433 [+], 465115352049MarR family transcriptional regulator 
17Bamb_19992194430..2196715 [+], 2286115352050ABC transporter-like protein 
18Bamb_20002196724..2197665 [+], 942115352051LysR family transcriptional regulator 
19Bamb_20012197662..2197928 [+], 267115352052putative lipoprotein 
20Bamb_20022198164..2200161 [+], 1998115352053conjugal transfer coupling protein TraG  TraG
21Bamb_20032200158..2200634 [+], 477115352054CopG/DNA-binding domain-containing protein 
22Bamb_20042200631..2201677 [+], 1047115352055type II secretion system protein E  TrbB
23Bamb_20052201674..2202057 [+], 384115352056conjugal transfer protein TrbC  TrbC
24Bamb_20062202054..2202338 [+], 285115352057putative conjugal transfer trbD transmembrane protein  TrbD
25Bamb_20072202351..2204801 [+], 2451115352058conjugal transfer ATPase TrbE  TrbE
26Bamb_20082204798..2205535 [+], 738115352059conjugal transfer protein TrbJ  TrbJ
27Bamb_20092205547..2205879 [+], 333115352060putative lipoprotein 
28Bamb_20102205876..2207270 [+], 1395115352061conjugal transfer protein TrbL  TrbL
29Bamb_20112207295..2207999 [+], 705115352062conjugal transfer protein TrbF  TrbF
30Bamb_20122207996..2209000 [+], 1005115352063conjugal transfer protein TrbG/VirB9/CagX  TrbG
31Bamb_20132209003..2210286 [+], 1284115352064conjugation TrbI family protein  TrbI
32Bamb_20142210283..2210537 [+], 255115352065hypothetical protein 
33Bamb_20152210526..2211146 [-], 621115352066hypothetical protein 
34Bamb_20162211236..2212228 [-], 993115352067transposase, IS4 family protein 
35Bamb_20172212278..2212652 [-], 375115352068hypothetical protein 
36Bamb_20182212885..2213271 [+], 387115352069phage transcriptional regulator AlpA 
37Bamb_20192213280..2213804 [-], 525115352070prophage CP4-57 regulatory 
38Bamb_20202213808..2214083 [-], 276115352071hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_008390