SecReT4
T4SS ID305
StrainParacoccus denitrificans PD1222
Repliconchromosome 2 [Browse all T4SS(s) in this replicon]
AccessionNC_008687
Location350279..368594
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_008687
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Pden_3176345773..346171 [-], 399119385898hypothetical protein 
2Pden_3177346168..346452 [-], 285119385899AbrB family transcriptional regulator 
3Pden_3178346610..346891 [+], 282119385900transcriptional regulator 
4Pden_3179346902..348014 [+], 1113119385901replication protein A 
5Pden_3180348011..348313 [+], 303119385902hypothetical protein 
6Pden_3181348310..348798 [+], 489119385903hypothetical protein 
7Pden_3182348795..350282 [+], 1488119385904C-5 cytosine-specific DNA methylase 
8Pden_3183350279..350881 [+], 603119385905conjugal transfer protein precursor  TraF
9Pden_3184350878..351216 [+], 339119385906hypothetical protein 
10Pden_3185351220..352026 [+], 807119385907lytic transglycosylase, catalytic  TrbN
11Pden_3186352076..352657 [+], 582119385908hypothetical protein 
12Pden_3187352908..354701 [+], 1794119385909hypothetical protein 
13Pden_3188354719..356728 [+], 2010119385910conjugal transfer coupling protein TraG  TraG
14Pden_3189356759..357280 [+], 522119385911hypothetical protein 
15Pden_3190357306..357827 [-], 522119385912hypothetical protein 
16Pden_3191357824..358063 [-], 240119385913hypothetical protein 
17Pden_3192358045..358470 [-], 426119385914twitching motility protein PilT 
18Pden_3193358467..358730 [-], 264119385915plasmid stabilization protein 
19Pden_3194359010..360014 [+], 1005119385916type II secretion system protein E  TrbB
20Pden_3195360011..360343 [+], 333119385917conjugal transfer protein TrbC  TrbC
21Pden_3196360343..360624 [+], 282119385918conjugal transfer protein TrbB  TrbD
22Pden_3197360637..363270 [+], 2634119385919conjugal transfer ATPase TrbE  TrbE
23Pden_3198363267..364064 [+], 798119385920conjugal transfer protein TrbJ  TrbJ
24Pden_3199364085..364372 [+], 288119385921hypothetical protein 
25Pden_3200364380..365702 [+], 1323119385922conjugal transfer protein TrbL  TrbL
26Pden_3201365699..366388 [+], 690119385923conjugal transfer protein TrbF  TrbF
27Pden_3202366385..367428 [+], 1044119385924conjugal transfer protein TrbG/VirB9/CagX  TrbG
28Pden_3203367428..368594 [+], 1167119385925conjugation TrbI family protein  TrbI
29Pden_3204368591..368845 [+], 255119385926hypothetical protein 
30Pden_3205368847..369791 [-], 945119385927LysR family transcriptional regulator 
31Pden_3206369824..370534 [-], 711119385928regulatory protein GntR 
32Pden_3207370806..372089 [-], 1284119385929TRAP dicarboxylate transporter, DctM subunit 
33Pden_3208372102..372653 [-], 552119385930hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_008687