SecReT4
T4SS ID308
StrainThioalkalivibrio sulfidophilus HL-EbGr7
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_011901
Location2004608..2030886
NameTrb
Functionconjugation
ClassificationType IVA; Type P
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_011901
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Tgr7_18741999702..2000007 [-], 306220935043XRE family transcriptional regulator 
2Tgr7_18752000251..2000601 [+], 351220935044lipoprotein 
3Tgr7_18762000910..2001671 [+], 762220935045hypothetical protein 
4Tgr7_18772001755..2002036 [+], 282220935046hypothetical protein 
5Tgr7_18782002063..2002920 [+], 858220935047replication initiator and transcription repressor protein 
6Tgr7_18792003174..2003812 [+], 639220935048Cobyrinic acid ac-diamide synthase 
7Tgr7_18802003809..2004081 [+], 273220935049hypothetical protein 
8Tgr7_18812004078..2004611 [+], 534220935050transposon 
9Tgr7_18822004608..2005207 [+], 600220935051serine peptidase  TraF
10Tgr7_18832005518..2007629 [+], 2112220935052hypothetical protein 
11Tgr7_18842007655..2008389 [-], 735220935053response regulator receiver protein 
12Tgr7_18852008373..2011114 [-], 2742220935054sensor protein KdpD 
13Tgr7_18862011207..2011662 [-], 456220935055PTS system, nitrogen regulatory IIA component 
14Tgr7_18872011659..2012315 [-], 657220935056Potassium-transporting ATPase 
15Tgr7_18882012326..2014365 [-], 2040220935057potassium-transporting ATPase subunit B 
16Tgr7_18892014376..2016085 [-], 1710220935058potassium-transporting ATPase subunit A 
17Tgr7_18902016140..2016817 [-], 678220935059hypothetical protein 
18Tgr7_18912017350..2018294 [+], 945220935060LysR family transcriptional regulator 
19Tgr7_18922018291..2018569 [+], 279220935061lipoprotein 
20Tgr7_18932018806..2020818 [+], 2013220935062conjugal transfer coupling protein TraG  TraG
21Tgr7_18942020815..2021279 [+], 465220935063CopG family transcriptional regulator 
22Tgr7_18952021276..2022346 [+], 1071220935064P-type conjugative transfer ATPase TrbB  TrbB
23Tgr7_18962022343..2022735 [+], 393220935065Conjugal transfer protein TrbC  TrbC
24Tgr7_18972022732..2023004 [+], 273220935066conjugal transfer TrbD transmembrane protein  TrbD
25Tgr7_18982023017..2025470 [+], 2454220935067conjugal transfer ATPase TrbE  TrbE
26Tgr7_18992025467..2026192 [+], 726220935068conjugal transfer protein TrbJ  TrbJ
27Tgr7_19002026204..2026524 [+], 321220935069lipoprotein 
28Tgr7_19012026521..2027903 [+], 1383220935070conjugal transfer protein TrbL  TrbL
29Tgr7_19022027916..2028620 [+], 705220935071conjugal transfer protein TrbF  TrbF
30Tgr7_19032028617..2029609 [+], 993220935072P-type conjugative transfer protein TrbG  TrbG
31Tgr7_19042029612..2030886 [+], 1275220935073conjugation TrbI family protein  TrbI
32Tgr7_19052030883..2031125 [+], 243220935074hypothetical protein 
33Tgr7_19062032038..2032595 [-], 558220935075CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
34Tgr7_19072032602..2034431 [-], 1830220935076excinuclease ABC subunit C 
35Tgr7_19082034451..2035107 [-], 657220935077hypothetical protein 
36Tgr7_19092035170..2035832 [-], 663220935078response regulator receiver protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICE(Tn4371)6071 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 0.543055556. [PudMed:19941653] in_silico
 
in_silico This literature contains bioinformatics investigation