SecReT4
T4SS ID310
StrainSphingobium japonicum UT26S
Repliconchromosome 1 [Browse all T4SS(s) in this replicon]
AccessionNC_014006
Location1987200..2003760
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number11111

The information of T4SS components from NC_014006
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SJA_C1-198201982723..1983193 [+], 471294011968peroxiredoxin/AhpC/Tsa family protein 
2SJA_C1-198301983200..1983430 [+], 231294011969peroxiredoxin/AhpC/Tsa family protein 
3SJA_C1-19840 (ahpC)1983594..1984256 [+], 663294011970peroxiredoxin/AhpC/Tsa family protein 
4SJA_C1-198501984264..1984452 [+], 189294011971hypothetical protein 
5SJA_C1-19860 (gst)1984483..1985115 [+], 633294011972glutathione S-transferase 
6SJA_C1-19870 (gst)1985185..1986060 [+], 876294011973glutathione S-transferase 
7SJA_C1-198801986057..1987031 [+], 975294011974LysR family transcriptional regulator 
8SJA_C1-198901986964..1987203 [-], 240294011975hypothetical protein 
9SJA_C1-19900 (virB10)1987200..1988468 [-], 1269294011976type IV secretory pathway VirB10 component  TrbI
10SJA_C1-19910 (virB9)1988465..1989532 [-], 1068294011977type IV secretory pathway VirB9 component  TrbG
11SJA_C1-19920 (trbF)1989529..1990212 [-], 684294011978type IV secretory pathway TrbF component  TrbF
12SJA_C1-19930 (trbL)1990212..1991576 [-], 1365294011979type IV secretory pathway TrbL component  TrbL
13SJA_C1-19940 (trbK)1991578..1991970 [-], 393294011980entry exclusion protein TrbK  TrbK
14SJA_C1-19950 (trbJ)1991984..1992760 [-], 777294011981conjugal transfer protein TrbJ  TrbJ
15SJA_C1-19960 (virB4)1992757..1995195 [-], 2439294011982type IV secretory pathway VirB4 component  TrbE
16SJA_C1-19970 (trbD)1995210..1995491 [-], 282294011983type IV secretory pathway TrbD component  TrbD
17SJA_C1-19980 (virB2)1995491..1995832 [-], 342294011984type IV secretory pathway VirB2 component  TrbC
18SJA_C1-19990 (trbB)1995829..1996773 [-], 945294011985conjugal transfer protein TrbB  TrbB
19SJA_C1-200001997068..1997607 [+], 540294011986hypothetical protein 
20SJA_C1-200101997546..1998067 [-], 522294011987hypothetical protein 
21SJA_C1-20020 (virD4)1998064..2000055 [-], 1992294011988type IV secretory pathway VirD4 component  TraG
22SJA_C1-20030 (virD2)2000080..2001834 [-], 1755294011989type IV secretory pathway VirD2 component 
23SJA_C1-200402002078..2002794 [-], 717294011990putative lytic transglycosylase  TrbN
24SJA_C1-200502002799..2003191 [-], 393294011991hypothetical protein 
25SJA_C1-20060 (traF)2003215..2003760 [-], 546294011992type IV secretory pathway protease TraF  TraF
26SJA_C1-200702003757..2004275 [-], 519294011993hypothetical protein 
27SJA_C1-200802004272..2004526 [-], 255294011994hypothetical protein 
28SJA_C1-200902004523..2005176 [-], 654294011995ParA-like protein 
29SJA_C1-20100 (repA)2005173..2006333 [-], 1161294011996plasmid replication initiator protein 
30SJA_C1-201102006351..2006632 [-], 282294011997hypothetical protein 
31SJA_C1-201202006772..2007098 [-], 327294011998hypothetical protein 
32SJA_C1-201302007238..2007546 [-], 309294011999hypothetical protein 
33SJA_C1-201402007663..2007935 [-], 273294012000hypothetical protein 
34SJA_C1-201502008040..2008291 [-], 252294012001XRE family transcriptional regulator 
35SJA_C1-201602008459..2008626 [-], 168294012002hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_014006