SecReT4
T4SS ID311
StrainSphingobium japonicum UT26S
Repliconchromosome 1 [Browse all T4SS(s) in this replicon]
AccessionNC_014006
Location2951831..2969837
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_014006
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SJA_C1-295802947232..2947921 [+], 690294012944SAM-dependent methyltransferase 
2SJA_C1-295902947938..2949860 [+], 1923294012945hypothetical protein 
3SJA_C1-296002949830..2951416 [+], 1587294012946hypothetical protein 
4SJA_C1-296102951594..2951821 [-], 228294012947hypothetical protein 
5SJA_C1-29620 (trbI)2951831..2953093 [-], 1263294012948conjugal transfer protein TrbI  TrbI
6SJA_C1-29630 (trbG)2953090..2953947 [-], 858294012949conjugal transfer protein TrbG  TrbG
7SJA_C1-29640 (trbF)2953944..2954720 [-], 777294012950conjugal transfer protein TrbF  TrbF
8SJA_C1-29650 (trbL)2954722..2956017 [-], 1296294012951conjugal transfer protein TrbL  TrbL
9SJA_C1-29660 (trbJ)2956143..2956892 [-], 750294012952conjugal transfer protein TrbJ  TrbJ
10SJA_C1-29670 (trbE)2956894..2959344 [-], 2451294012953conjugal transfer protein TrbE  TrbE
11SJA_C1-29680 (trbD)2959338..2959598 [-], 261294012954conjugal transfer protein TrbD  TrbD
12SJA_C1-29690 (trbC)2959595..2959882 [-], 288294012955conjugal transfer protein TrbC  TrbC
13SJA_C1-29700 (trbB)2959939..2960961 [-], 1023294012956conjugal transfer protein TrbB  TrbB
14SJA_C1-297102960958..2961374 [-], 417294012957hypothetical protein 
15SJA_C1-29720 (traG)2961371..2963392 [-], 2022294012958conjugal transfer protein TraG  TraG
16SJA_C1-297302963538..2964497 [-], 960294012959putative nucleotidyltransferase 
17SJA_C1-297402964618..2964908 [+], 291294012960CopG-family transcriptional regulator 
18SJA_C1-29750 (traI)2965034..2967046 [-], 2013294012961conjugal transfer protein TraI 
19SJA_C1-297602967413..2967532 [+], 120294012962hypothetical protein 
20SJA_C1-297702967525..2967773 [+], 249294012963hypothetical protein 
21SJA_C1-297802967845..2968324 [-], 480294012964hypothetical protein 
22SJA_C1-297902968627..2969277 [-], 651294012965putative lytic transglycosylase  TrbN
23SJA_C1-29800 (traF)2969265..2969837 [-], 573294012966conjugal transfer protein TraF  TraF
24SJA_C1-298102969834..2970091 [-], 258294012967hypothetical protein 
25SJA_C1-298202970267..2970587 [-], 321294012968hypothetical protein 
26SJA_C1-298302970578..2970937 [+], 360294012969hypothetical protein 
27SJA_C1-298402970938..2971414 [+], 477294012970hypothetical protein 
28SJA_C1-298502971461..2971796 [-], 336294012971PemK-like protein 
29SJA_C1-298602971796..2972038 [-], 243294012972PemI-like protein 
30SJA_C1-298702972163..2972372 [-], 210294012973hypothetical protein 
31SJA_C1-298802972553..2974427 [-], 1875294012974ParB-like protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_014006