SecReT4
T4SS ID312
StrainPseudomonas mendocina NK-01
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_015410
Location3189465..3215014
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_015410
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1MDS_28823185912..3186424 [+], 513330503796antirestriction protein family protein 
2MDS_28833186929..3187300 [+], 372330503797hypothetical protein 
3MDS_28843187312..3188139 [+], 828330503798putative replication initiator and transcription repressor protein 
4MDS_28853188169..3188387 [+], 219330503799hypothetical protein 
5MDS_28863188384..3189022 [+], 639330503800cobyrinic acid a,c-diamide synthase 
6MDS_28873189019..3189261 [+], 243330503801putative ParB partition protein 
7MDS_28883189465..3189782 [+], 318330503802conjugative transfer signal peptidase TraF  TraF
8MDS_28893190133..3192082 [+], 1950330503803hypothetical protein 
9MDS_28903192100..3192954 [-], 855330503804putative DNA-binding protein 
10MDS_28913193110..3194342 [+], 12333305038055-aminolevulinate synthase 
11MDS_28923194344..3194847 [+], 504330503806acetyltransferase 
12MDS_28933194844..3195914 [+], 1071330503807putative oxidoreductase 
13MDS_28943195937..3197790 [+], 1854330503808asparagine synthetase 
14MDS_28953197876..3199075 [+], 1200330503809MFS transporter 
15MDS_28963199089..3200015 [+], 927330503810LysR family transcriptional regulator 
16MDS_28973200370..3200516 [+], 147330503811hypothetical protein 
17MDS_28983200513..3200821 [+], 309330503812putative DNA-binding protein 
18MDS_28993203484..3205475 [+], 1992330503813conjugal transfer coupling protein TraG  TraG
19MDS_29003205472..3205906 [+], 435330503814CopG/DNA-binding domain-containing protein 
20MDS_29013205966..3206934 [+], 969330503815type II secretion system protein E  TrbB
21MDS_29023206906..3207247 [+], 342330503816conjugal transfer protein TrbC  TrbC
22MDS_29033207244..3207516 [+], 273330503817putative conjugal transfer TrbD transmembrane protein  TrbD
23MDS_29043207528..3209957 [+], 2430330503818conjugal transfer ATPase TrbE  TrbE
24MDS_29053209954..3210688 [+], 735330503819conjugal transfer protein TrbJ  TrbJ
25MDS_29063210701..3210886 [+], 186330503820hypothetical protein 
26MDS_29073210883..3212043 [+], 1161330503821conjugal transfer protein TrbL  TrbL
27MDS_29083212056..3212763 [+], 708330503822conjugal transfer protein TrbF  TrbF
28MDS_29093212760..3213746 [+], 987330503823P-type conjugative transfer protein TrbG  TrbG
29MDS_29103213749..3215014 [+], 1266330503824conjugation TrbI family protein  TrbI
30MDS_29113215011..3215244 [+], 234330503825hypothetical protein 
31MDS_29123215445..3215615 [+], 171330503826proteic killer protein 
32MDS_29133215633..3215920 [+], 288330503827antitoxin protein 
33MDS_29143216219..3217415 [-], 1197330503828hypothetical protein 
34MDS_29153217415..3217666 [-], 252330503829XRE family transcriptional regulator 
35MDS_29163217953..3219443 [-], 1491330503830hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_015410