SecReT4
T4SS ID316
StrainSphingobium sp. SYK-6
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_015976
Location3275257..3295368
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_015976
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SLG_302203270299..3271021 [+], 723347529406hypothetical protein 
2SLG_302303271037..3271684 [+], 648347529407hypothetical protein 
3SLG_302403271801..3272235 [+], 435347529408hypothetical protein 
4SLG_302503272273..3273607 [+], 1335347529409putative nickel resistance protein 
5SLG_302603273768..3274715 [+], 948347529410LysR family transcriptional regulator 
6SLG_302703274712..3275020 [+], 309347529411hypothetical protein 
7SLG_302803275039..3275260 [-], 222347529412hypothetical protein 
8SLG_302903275257..3276474 [-], 1218347529413conjugal transfer protein TrbI  TrbI
9SLG_303003276471..3277487 [-], 1017347529414conjugal transfer protein TrbG  TrbG
10SLG_303103277484..3278167 [-], 684347529415conjugal transfer protein TrbF  TrbF
11SLG_303203278174..3279559 [-], 1386347529416conjugal transfer protein TrbL  TrbL
12SLG_303303279556..3279858 [-], 303347529417hypothetical protein 
13SLG_303403279867..3280583 [-], 717347529418conjugal transfer protein TrbJ  TrbJ
14SLG_303503280580..3283036 [-], 2457347529419conjugal transfer protein TrbE  TrbE
15SLG_303603283033..3283314 [-], 282347529420type IV secretory pathway TrbD component  TrbD
16SLG_303703283311..3283646 [-], 336347529421conjugal transfer protein TrbC  TrbC
17SLG_303803283643..3284629 [-], 987347529422conjugal transfer protein TrbB  TrbB
18SLG_303903284795..3285445 [-], 651347529423hypothetical protein 
19SLG_304003285505..3288519 [-], 3015347529424hypothetical protein 
20SLG_304103288574..3288864 [-], 291347529425hypothetical protein 
21SLG_304203288949..3289374 [-], 426347529426hypothetical protein 
22SLG_304303289371..3291401 [-], 2031347529427conjugal transfer protein TraG  TraG
23SLG_304403291581..3293374 [-], 1794347529428conjugal transfer protein TraI 
24SLG_304503293571..3294473 [-], 903347529429putative transglycosylase  TrbN
25SLG_304603294477..3294809 [-], 333347529430hypothetical protein 
26SLG_304703294790..3295368 [-], 579347529431conjugal transfer protein TraF  TraF
27SLG_304803295365..3295883 [-], 519347529432hypothetical protein 
28SLG_304903296122..3297015 [-], 894347529433putative replication protein A 
29SLG_305003297021..3297287 [-], 267347529434hypothetical protein 
30SLG_305103297407..3298204 [-], 798347529435hypothetical protein 
31SLG_305203298353..3298691 [-], 339347529436hypothetical protein 
32SLG_305303298746..3298997 [-], 252347529437hypothetical protein 
33SLG_305403299226..3300068 [-], 843347529438hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_015976