SecReT4
T4SS ID317
StrainMesorhizobium loti MAFF303099
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_002678
Location5217849..5229642
NameTrb
Functionconjugation
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number110111011
ComponentTrbKTrbLTrbNTraFTraG
Number01001

The information of T4SS components from NC_002678
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1mlr63905214702..5216027 [+], 132613475345coproporphyrinogen III oxidase 
2mll63915216029..5216304 [-], 27613475346hypothetical protein 
3msl63925216337..5216495 [-], 15913475347hypothetical protein 
4mlr63945216933..5217364 [+], 43213475348hypothetical protein 
5mlr63955217849..5220056 [+], 220813475349conjugal transfer protein TraG  TraG
6msl86985220082..5220378 [-], 29713475350hypothetical protein 
7mlr63965220397..5220588 [+], 19213475351hypothetical protein 
8mlr63975220585..5221553 [+], 96913475352conjugal transfer protein traB  TrbB
9mlr63985221565..5221873 [+], 30913475353conjugal transfer protein TRBC  TrbC
10mlr64005222139..5224589 [+], 245113475354conjugal transfer ATPase TrbE  TrbE
11mlr64015224586..5225311 [+], 72613475355conjugal transfer protein TrbJ  TrbJ
12mlr64025225343..5226665 [+], 132313475356conjugal transfer protein TrbL  TrbL
13mlr64035226666..5227391 [+], 72613475357conjugal transfer protein TrbF  TrbF
14mlr64045227418..5228416 [+], 99913475358conjugal transfer protein trbG  TrbG
15mlr64055228413..5229642 [+], 123013475359conjugal transfer protein trbI  TrbI
16msr64065229655..5229924 [+], 27013475360hypothetical protein 
17mll64085230462..5231811 [-], 135013475361coproporphyrinogen III oxidase 
18mlr64095231969..5232724 [+], 75613475362transcriptional regulator 
19mll64105232728..5233267 [-], 54013475363hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEMloMAF-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Kaneko T; Nakamura Y; Sato S; Asamizu E; Kato T; Sasamoto S; Watanabe A; Idesawa K; Ishikawa A; Kawashima K; Kimura T; Kishida Y; Kiyokawa C; Kohara M; Matsumoto M; Matsuno A; Mochizuki Y; Nakayama S; Nakazaki N; Shimpo S; Sugimoto M; Takeuchi C; Yamada M; Tabata S (2000). Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti. DNA Res. 7(6):331-8. [PudMed:11214968]