SecReT4
T4SS ID319
StrainDickeya dadantii 3937
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_014500
Location867251..867796; 890107..901339
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_014500
Region 1: 867251..867796
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Dda3937_01708862740..863057 [+], 318307129554hypothetical protein 
2Dda3937_01709863257..863496 [+], 240307129555antitoxin of gyrase inhibiting toxin-antitoxin system 
3Dda3937_01710863499..863807 [+], 309307129556toxin of gyrase inhibiting toxin-antitoxin system 
4Dda3937_01711863921..864589 [+], 669307129557hypothetical protein 
5Dda3937_01712864924..865721 [+], 798307129558hypothetical protein 
6Dda3937_01713865994..866101 [+], 108307129559hypothetical protein 
7Dda3937_01714866128..866940 [+], 813307129560plasmid replication initiator protein 
8Dda3937_01715867020..867268 [-], 249307129561hypothetical protein 
9Dda3937_01716867251..867796 [+], 546307129562type IV secretory pathway, protease TraF  TraF
10Dda3937_01717867970..869937 [+], 1968307129563VirD2 components relaxase 
11Dda3937_04475869944..870162 [+], 219307129564Integrase 
12Dda3937_01718870159..870257 [+], 99307129565Prophage P4 integrase 
13Dda3937_01719870481..872130 [+], 1650307129566hypothetical protein 
 
Region 2: 890107..901339
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Dda3937_04476885980..886195 [-], 216307129574hypothetical protein 
2Dda3937_01729886566..886736 [+], 171307129575VirD2 components relaxase 
3Dda3937_01730886774..887124 [-], 351307129576hypothetical protein 
4Dda3937_01731887405..887608 [+], 204307129577transposase 
5Dda3937_01732887755..888057 [-], 303307129578hypothetical protein 
6Dda3937_01733888233..888538 [+], 306307129579regulator for maltose metabolism 
7Dda3937_01734888702..889628 [+], 927307129580transcriptional regulator 
8Dda3937_01735889653..889913 [+], 261307129581lipoprotein 
9Dda3937_01736890107..892086 [+], 1980307129582TRAG protein  TraG
10Dda3937_01737892083..892523 [+], 441307129583hypothetical protein 
11Dda3937_01738892520..893530 [+], 1011307129584Conjugative transfer protein TrbB  TrbB
12Dda3937_01739893527..893874 [+], 348307129585Conjugative transfer protein TrbC  TrbC
13Dda3937_01740893871..894143 [+], 273307129586Conjugative transfer protein TrbD  TrbD
14Dda3937_01741894136..896604 [+], 2469307129587Conjugative transfer protein TrbE  TrbE
15Dda3937_01742896526..897335 [+], 810307129588Conjugative transfer protein TrbJ  TrbJ
16Dda3937_01743897332..898498 [+], 1167307129589Conjugative transfer protein TrbL  TrbL
17Dda3937_01744898495..899205 [+], 711307129590Conjugative transfer protein TrbF  TrbF
18Dda3937_01745899163..900098 [+], 936307129591Conjugative transfer protein TrbG  TrbG
19Dda3937_01746900095..901339 [+], 1245307129592Conjugative transfer protein TrbI  TrbI
20Dda3937_01747901385..901696 [-], 312307129593plasmid stabilization system protein 
21Dda3937_01748901693..901977 [-], 285307129594DNA-damage-inducible protein J 
22Dda3937_04477901976..902188 [+], 213307129595hypothetical protein 
23Dda3937_01749902452..903081 [+], 630307129596hypothetical protein 
24Dda3937_01750903078..903527 [+], 450307129597hypothetical protein 
25Dda3937_04478903527..904039 [+], 513307129598hypothetical protein 
26Dda3937_04479904367..904684 [+], 318307129599recombinase 
27Dda3937_01751904677..905084 [-], 408307129600DNA-binding protein H-NS 
28Dda3937_01752905144..905389 [-], 246307129601hypothetical protein 
29Dda3937_01753905379..905648 [-], 270307129602MunI regulatory protein 
30Dda3937_01754905690..905920 [-], 231307129603MunI regulatory protein 
31Dda3937_01755906023..906268 [+], 246307129604transcriptional regulator 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_014500