SecReT4
T4SS ID321
StrainAgrobacterium vitis S4
Repliconplasmid pAtS4c [Browse all T4SS(s) in this replicon]
AccessionNC_011984
Location142668..149219; 201057..210732
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number11011

The information of T4SS components from NC_011984
Region 1: 142668..149219
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Avi_9174138522..139493 [+], 972222083257hypothetical protein 
2Avi_9175140093..140449 [+], 357222083258hypothetical protein 
3Avi_9177140770..140940 [+], 171222083259hypothetical protein 
4Avi_9178140982..141260 [-], 279222083260HNS-type DNA binding protein 
5Avi_9182141398..141655 [-], 258222083261hypothetical protein 
6Avi_9184141893..142276 [-], 384222083262nuclease protein 
7Avi_9185142273..142671 [-], 399222083263hypothetical protein 
8Avi_9186 (traG)142668..144638 [-], 1971222083264conjugal transfer coupling protein TraG  TraG
9Avi_9187 (traD)144625..144870 [-], 246222083265conjugal transfer protein TraD 
10Avi_9188 (traC)144845..145222 [-], 378222083266conjugal transfer protein Dtr system 
11Avi_9189 (traA)145321..148692 [+], 3372222083267Dtr system oriT relaxase 
12Avi_9191 (traF)148689..149219 [+], 531222083268conjugal transfer pilin processing protease TraF  TraF
13Avi_9192 (traB)149236..150447 [+], 1212222083269conjugal transfer protein TraB 
14Avi_9193 (traH)150465..151091 [+], 627222083270conjugal transfer protein TraH 
15Avi_9194 (traM)151405..151713 [+], 309222083271transcriptional repressor 
16Avi_9195 (traR)151773..152477 [-], 705222083272transcriptional regulator TraR 
17Avi_9196152864..153658 [-], 795222083273hypothetical protein 
 
Region 2: 201057..210732
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Avi_9251196892..197008 [-], 117222083308transposase 
2Avi_9252197317..198570 [+], 1254222083309phosphonoacetate hydrolase 
3Avi_9253198594..199517 [-], 924222083310LysR family transcriptional regulator 
4Avi_9254200194..200544 [-], 351222083311hypothetical protein 
5Avi_9257 (trbI)201057..202370 [-], 1314222083312conjugal transfer protein TrbI  TrbI
6Avi_9258 (trbH)202382..202858 [-], 477222083313conjugal transfer protein TrbH  TrbH
7Avi_9259 (trbG)202858..203748 [-], 891222083314conjugal transfer protein TrbG  TrbG
8Avi_9260 (trbF)203730..204392 [-], 663222083315conjugal transfer protein TrbF  TrbF
9Avi_9261 (trbL)204407..205603 [-], 1197222083316conjugal transfer protein TrbL  TrbL
10Avi_9262 (trbK)205597..205818 [-], 222222083317entry-exclusion protein  TrbK
11Avi_9263 (trbJ)205815..206624 [-], 810222083318conjugal transfer protein TrbJ  TrbJ
12Avi_9265 (trbE)206596..209064 [-], 2469222083319conjugal transfer protein TrbE  TrbE
13Avi_9267 (trbD)209075..209374 [-], 300222083320conjugal transfer protein TrbD  TrbD
14Avi_9268 (trbC)209367..209771 [-], 405222083321conjugal transfer protein TrbC  TrbC
15Avi_9269 (trbB)209761..210732 [-], 972222083322conjugal transfer protein TrbB  TrbB
16Avi_9270 (traI)210729..211367 [-], 639222083323putative autoinducer synthesis protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_011984