SecReT4
T4SS ID328
StrainSphingopyxis alaskensis RB2256
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_008048
Location2615962..2634363
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number110111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_008048
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Sala_24722611327..2612226 [-], 900103487951phosphoribosylpyrophosphate synthetase 
2Sala_24732612223..2613767 [-], 1545103487952thymidine phosphorylase 
3Sala_24742613764..2615185 [-], 1422103487953beta-lactamase-like protein 
4Sala_24752615345..2615644 [-], 300103487954hypothetical protein 
5Sala_24762615744..2615965 [-], 222103487955hypothetical protein 
6Sala_24772615962..2617143 [-], 1182103487956conjugation TrbI-like protein  TrbI
7Sala_24782617173..2618024 [-], 852103487957conjugal transfer protein TrbG/VirB9/CagX  TrbG
8Sala_24792618021..2618704 [-], 684103487958conjugal transfer protein TrbF  TrbF
9Sala_24802618711..2619991 [-], 1281103487959conjugal transfer protein TrbL  TrbL
10Sala_24812619988..2620242 [-], 255103487960hypothetical protein 
11Sala_24822620244..2620963 [-], 720103487961conjugal transfer protein TrbJ  TrbJ
12Sala_24832620969..2623413 [-], 2445103487962conjugal transfer ATPase TrbE  TrbE
13Sala_24842623679..2624011 [-], 333103487963conjugal transfer protein TrbC  TrbC
14Sala_24852624008..2624991 [-], 984103487964type II secretion system protein E  TrbB
15Sala_24862625126..2625701 [+], 576103487965LuxR family transcriptional regulator 
16Sala_24872625761..2626093 [+], 333103487966hypothetical protein 
17Sala_24882626482..2627546 [+], 1065103487967DNA repair protein RadC 
18Sala_24892627631..2630441 [-], 2811103487968TrwC protein 
19Sala_24902630441..2632330 [-], 1890103487969Type IV secretory pathway VirD4 components-like protein  TraG
20Sala_24912632330..2632827 [-], 498103487970hypothetical protein 
21Sala_24922633048..2633776 [-], 729103487971lytic transglycosylase, catalytic  TrbN
22Sala_24932633773..2634363 [-], 591103487972conjugal transfer protein traF  TraF
23Sala_24942634360..2634905 [-], 546103487973hypothetical protein 
24Sala_24952634905..2635147 [-], 243103487974putative transcriptional regulator 
25Sala_24962635250..2635759 [-], 510103487975hypothetical protein 
26Sala_24972636150..2636464 [-], 315103487976hypothetical protein 
27Sala_24982636775..2637245 [-], 471103487977hypothetical protein 
28Sala_24992637330..2637572 [-], 243103487978hypothetical protein 
29Sala_25002637612..2637914 [-], 303103487979hypothetical protein 
30Sala_25012637963..2638283 [-], 321103487980hypothetical protein 
31Sala_25022638892..2639146 [-], 255103487981hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_008048