SecReT4
T4SS ID329
StrainSphingopyxis alaskensis RB2256
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_008048
Location2746924..2764098
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_008048
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Sala_26022743790..2745553 [-], 1764103488080asparagine synthase 
2Sala_26032745550..2746209 [-], 660103488081hypothetical protein 
3Sala_26042746688..2746924 [-], 237103488082hypothetical protein 
4Sala_26052746924..2748216 [-], 1293103488083conjugation TrbI-like protein  TrbI
5Sala_26062748213..2749226 [-], 1014103488084conjugal transfer protein TrbG/VirB9/CagX  TrbG
6Sala_26072749223..2749906 [-], 684103488085conjugal transfer protein TrbF  TrbF
7Sala_26082749925..2751298 [-], 1374103488086conjugal transfer protein TrbL  TrbL
8Sala_26092751295..2751543 [-], 249103488087hypothetical protein 
9Sala_26102751545..2752267 [-], 723103488088conjugal transfer protein TrbJ  TrbJ
10Sala_26112752264..2754753 [-], 2490103488089conjugal transfer ATPase TrbE  TrbE
11Sala_26122754750..2755019 [-], 270103488090putative conjugal transfer protein  TrbD
12Sala_26132755019..2755363 [-], 345103488091conjugal transfer protein TrbC  TrbC
13Sala_26142755360..2756343 [-], 984103488092type II secretion system protein E  TrbB
14Sala_26152756368..2756685 [-], 318103488093hypothetical protein 
15Sala_26162756756..2757862 [+], 1107103488094filamentation induced by cAMP protein fic 
16Sala_26172757835..2758287 [-], 453103488095hypothetical protein 
17Sala_26182758284..2760347 [-], 2064103488096conjugal transfer coupling protein TraG  TraG
18Sala_26192760382..2762127 [-], 1746103488097hypothetical protein 
19Sala_26202762372..2763160 [-], 789103488098lytic transglycosylase, catalytic  TrbN
20Sala_26212763164..2763508 [-], 345103488099hypothetical protein 
21Sala_26222763499..2764098 [-], 600103488100conjugal transfer protein traF  TraF
22Sala_26232764095..2764613 [-], 519103488101hypothetical protein 
23Sala_26242764891..2765775 [-], 885103488102putative replication protein A 
24Sala_26252765780..2766040 [-], 261103488103hypothetical protein 
25Sala_26262766168..2766512 [-], 345103488104hypothetical protein 
26Sala_26272766607..2767050 [+], 444103488105hypothetical protein 
27Sala_26282767074..2767391 [-], 318103488106hypothetical protein 
28Sala_26292767636..2767893 [+], 258103488107hypothetical protein 
29Sala_26302767976..2768428 [-], 453103488108hypothetical protein 
30Sala_26312768573..2768737 [-], 165103488109hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_008048