SecReT4
T4SS ID330
StrainRalstonia pickettii 12J
Repliconchromosome 1 [Browse all T4SS(s) in this replicon]
AccessionNC_010682
Location2757009..2768795
NameTrb
Functionconjugation
ClassificationType IVA; Type P
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01001

The information of T4SS components from NC_010682
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Rpic_26382752115..2753896 [+], 1782187929709acyl-CoA dehydrogenase domain-containing protein 
2Rpic_26392753921..2754670 [+], 750187929710electron transfer flavoprotein alpha/beta-subunit 
3Rpic_26402754671..2755603 [+], 933187929711electron transfer flavoprotein subunit alpha 
4Rpic_26412755621..2756535 [+], 915187929712LysR family transcriptional regulator 
5Rpic_26422756561..2756791 [+], 231187929713hypothetical protein 
6Rpic_26432757009..2759027 [+], 2019187929714conjugal transfer coupling protein TraG  TraG
7Rpic_26442759024..2759488 [+], 465187929715DNA-binding domain-containing protein 
8Rpic_26452759485..2760522 [+], 1038187929716P-type conjugative transfer ATPase TrbB  TrbB
9Rpic_26462760519..2760911 [+], 393187929717conjugal transfer protein Trbc  TrbC
10Rpic_26472760908..2761192 [+], 285187929718putative conjugal transfer TrbD transmembrane protein  TrbD
11Rpic_26482761212..2763689 [+], 2478187929719conjugal transfer ATPase TrbE  TrbE
12Rpic_26492763686..2764441 [+], 756187929720conjugal transfer protein TrbJ  TrbJ
13Rpic_26502764454..2765806 [+], 1353187929721conjugal transfer protein TrbL  TrbL
14Rpic_26512765825..2766529 [+], 705187929722conjugal transfer protein TrbF  TrbF
15Rpic_26522766526..2767521 [+], 996187929723P-type conjugative transfer protein TrbG  TrbG
16Rpic_26532767524..2768795 [+], 1272187929724conjugation TrbI family protein  TrbI
17Rpic_26542768792..2769037 [+], 246187929725hypothetical protein 
18Rpic_26552769315..2769980 [-], 666187929726putative partition-like protein 
19Rpic_26562770055..2771551 [-], 1497187929727cobyric acid synthase 
20Rpic_26572771613..2772188 [+], 576187929728adenosylcobinamide-phosphate guanylyltransferase 
21Rpic_2658 (cobD)2772185..2773165 [+], 981187929729cobalamin biosynthesis protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICE(Tn4371)6033 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 0.543055556. [PudMed:19941653] in_silico
 
in_silico This literature contains bioinformatics investigation