SecReT4
T4SS ID331
StrainParacoccus denitrificans PD1222
Repliconchromosome 1 [Browse all T4SS(s) in this replicon]
AccessionNC_008686
Location121919..140139
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_008686
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Pden_0131117115..117384 [+], 270119382888hypothetical protein 
2Pden_0132117381..118250 [+], 870119382889replication protein A 
3Pden_0133118506..119006 [+], 501119382890hypothetical protein 
4Pden_0134119003..120622 [+], 1620119382891transposase IS116/IS110/IS902 family protein 
5Pden_0135121111..121665 [+], 555119382892hypothetical protein 
6Pden_0136121919..122851 [+], 933119382893hypothetical protein  TraF
7Pden_0137122855..123550 [+], 696119382894lytic transglycosylase, catalytic  TrbN
8Pden_0138123600..124181 [+], 582119382895hypothetical protein 
9Pden_0139124423..126159 [+], 1737119382896hypothetical protein 
10Pden_0140126242..126493 [+], 252119382897prevent-host-death family protein 
11Pden_0141126578..126934 [+], 357119382898twitching motility protein PilT 
12Pden_0142127107..129131 [+], 2025119382899conjugal transfer protein TraG  TraG
13Pden_0143129135..129545 [+], 411119382900hypothetical protein 
14Pden_0144129586..129894 [-], 309119382901plasmid stabilization system protein 
15Pden_0145129891..130160 [-], 270119382902CopG family transcriptional regulator 
16Pden_0146130357..130599 [-], 243119382903hypothetical protein 
17Pden_0147130604..131779 [-], 1176119382904conjugation TrbI family protein  TrbI
18Pden_0148131779..132783 [-], 1005119382905conjugal transfer protein TrbG/VirB9/CagX  TrbG
19Pden_0149132780..133469 [-], 690119382906conjugal transfer protein TrbF  TrbF
20Pden_0150133466..134785 [-], 1320119382907conjugal transfer protein TrbL  TrbL
21Pden_0151134793..135080 [-], 288119382908hypothetical protein 
22Pden_0152135101..135901 [-], 801119382909conjugal transfer protein TrbJ  TrbJ
23Pden_0153135898..138516 [-], 2619119382910conjugal transfer ATPase TrbE  TrbE
24Pden_0154138528..138809 [-], 282119382911conjugal transfer protein TrbB  TrbD
25Pden_0155138809..139138 [-], 330119382912conjugal transfer protein TrbC  TrbC
26Pden_0156139135..140139 [-], 1005119382913type II secretion system protein E  TrbB
27Pden_0157140328..141215 [-], 888119382914LysR family transcriptional regulator 
28Pden_0158141246..141467 [-], 222119382915hypothetical protein 
29Pden_0159141627..141974 [-], 348119382916hypothetical protein 
30Pden_0160142033..145134 [-], 3102119382917acriflavin resistance protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_008686