SecReT4
T4SS ID332
StrainParacoccus denitrificans PD1222
Repliconchromosome 1 [Browse all T4SS(s) in this replicon]
AccessionNC_008686
Location1436499..1445972; 1470887..1476608
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_008686
Region 1: 1436499..1445972
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Pden_14691432068..1432523 [+], 456119384209AsnC family transcriptional regulator 
2Pden_14701432553..1433176 [+], 624119384210lysine exporter protein LysE/YggA 
3Pden_14711433351..1434349 [+], 999119384211LysR family transcriptional regulator 
4Pden_14721434342..1435595 [+], 1254119384212type 12 methyltransferase 
5Pden_14731435611..1436129 [-], 519119384213dehydratase 
6Pden_14741436263..1436496 [-], 234119384214hypothetical protein 
7Pden_14751436499..1437620 [-], 1122119384215conjugation TrbI family protein  TrbI
8Pden_14761437617..1438645 [-], 1029119384216conjugal transfer protein TrbG/VirB9/CagX  TrbG
9Pden_14771438642..1439331 [-], 690119384217conjugal transfer protein TrbF  TrbF
10Pden_14781439328..1440680 [-], 1353119384218conjugal transfer protein TrbL  TrbL
11Pden_14791440684..1440971 [-], 288119384219hypothetical protein 
12Pden_14801440989..1441771 [-], 783119384220conjugal transfer protein TrbJ  TrbJ
13Pden_14811441768..1444278 [-], 2511119384221conjugal transfer ATPase TrbE  TrbE
14Pden_14821444285..1444578 [-], 294119384222conjugal transfer protein trbB  TrbD
15Pden_14831444645..1444977 [-], 333119384223conjugal transfer protein TrbC  TrbC
16Pden_14841444974..1445972 [-], 999119384224type II secretion system protein E  TrbB
17Pden_14851446345..1447265 [+], 921119384225helix-turn-helix domain-containing protein 
18Pden_14861447354..1449435 [+], 2082119384226TonB-dependent receptor 
19Pden_14871449435..1450445 [+], 1011119384227type 12 methyltransferase 
 
Region 2: 1470887..1476608
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Pden_15001466069..1467028 [+], 960119384240helix-turn-helix domain-containing protein 
2Pden_15011467357..1467746 [-], 390119384241hypothetical protein 
3Pden_15021467733..1468083 [-], 351119384242hypothetical protein 
4Pden_15031468070..1469287 [-], 1218119384243hypothetical protein 
5Pden_15041469486..1470022 [-], 537119384244hypothetical protein 
6Pden_15051470456..1470884 [-], 429119384245hypothetical protein 
7Pden_15061470887..1472872 [-], 1986119384246conjugal transfer coupling protein TraG  TraG
8Pden_15071472899..1474653 [-], 1755119384247hypothetical protein 
9Pden_15081474897..1475661 [-], 765119384248lytic transglycosylase, catalytic  TrbN
10Pden_15091475664..1475999 [-], 336119384249hypothetical protein 
11Pden_15101476066..1476608 [-], 543119384250conjugal transfer protein precursor  TraF
12Pden_15111476605..1477126 [-], 522119384251hypothetical protein 
13Pden_15121477126..1478298 [-], 1173119384252replication protein A 
14Pden_15131478317..1478598 [-], 282119384253hypothetical protein 
15Pden_15141478736..1479131 [-], 396119384254hypothetical protein 
16Pden_15151479202..1479561 [-], 360119384255hypothetical protein 
17Pden_15161479617..1479880 [-], 264119384256hypothetical protein 
18Pden_15171479986..1480243 [-], 258119384257XRE family transcriptional regulator 
19Pden_15181480430..1480753 [-], 324119384258hypothetical protein 
20Pden_15191480790..1481251 [+], 462119384259hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_008686