SecReT4
T4SS ID344
StrainDelftia acidovorans SPH-1
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010002
Location460047..487277
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_010002
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Daci_0422455427..455687 [-], 261160895871hypothetical protein 
2Daci_0423455796..456338 [-], 543160895872hypothetical protein 
3Daci_0424456340..457212 [-], 873160895873hypothetical protein 
4Daci_0425457246..457833 [-], 588160895874LemA family protein 
5Daci_0426457982..458968 [+], 987160895875alpha/beta hydrolase fold protein 
6Daci_0427458974..459525 [+], 552160895876hypothetical protein 
7Daci_0428459805..460050 [-], 246160895877hypothetical protein 
8Daci_0429460047..461321 [-], 1275160895878conjugation TrbI family protein  TrbI
9Daci_0430461324..462313 [-], 990160895879P-type conjugative transfer protein TrbG  TrbG
10Daci_0431462310..463014 [-], 705160895880conjugal transfer protein TrbF  TrbF
11Daci_0432463033..464406 [-], 1374160895881conjugal transfer protein TrbL  TrbL
12Daci_0433464403..464702 [-], 300160895882putative lipoprotein 
13Daci_0434464715..465440 [-], 726160895883conjugal transfer protein TrbJ  TrbJ
14Daci_0435465437..467890 [-], 2454160895884conjugal transfer ATPase TrbE  TrbE
15Daci_0436467906..468178 [-], 273160895885putative conjugal transfer TrbD transmembrane protein  TrbD
16Daci_0437468175..468558 [-], 384160895886conjugal transfer protein TrbC  TrbC
17Daci_0438468555..469616 [-], 1062160895887P-type conjugative transfer ATPase TrbB  TrbB
18Daci_0439469613..470077 [-], 465160895888CopG/DNA-binding domain-containing protein 
19Daci_0440470074..472095 [-], 2022160895889conjugal transfer coupling protein TraG  TraG
20Daci_0441472313..472531 [-], 219160895890hypothetical protein 
21Daci_0442472554..473480 [-], 927160895891LysR family transcriptional regulator 
22Daci_0443473628..473867 [-], 240160895892hypothetical protein 
23Daci_0444474041..474967 [-], 927160895893copper resistance D domain-containing protein 
24Daci_0445474972..475358 [-], 387160895894copper resistance protein CopC 
25Daci_0446475500..477980 [-], 2481160895895heavy metal translocating P-type ATPase 
26Daci_0447478093..478365 [-], 273160895896hypothetical protein 
27Daci_0448478399..478884 [-], 486160895897hypothetical protein 
28Daci_0449478922..479902 [-], 981160895898copper resistance B 
29Daci_0450479928..481829 [-], 1902160895899CopA family copper resistance protein 
30Daci_0451482085..482777 [+], 693160895900two component heavy metal response transcriptional regulator 
31Daci_0452482749..484182 [+], 1434160895901heavy metal sensor signal transduction histidine kinase 
32Daci_0453484259..486295 [-], 2037160895902hypothetical protein 
33Daci_0454486690..487277 [-], 588160895903putative conjugal transfer TRAF transmembrane protein  TraF
34Daci_0455487274..487831 [-], 558160895904hypothetical protein 
35Daci_0456487828..488103 [-], 276160895905hypothetical protein 
36Daci_0457488100..488738 [-], 639160895906cobyrinic acid ac-diamide synthase 
37Daci_0458488992..489849 [-], 858160895907putative replication initiator and transcription repressor protein 
38Daci_0459490250..491023 [-], 774160895908hypothetical protein 
39Daci_0460491367..491714 [-], 348160895909putative lipoprotein 
40Daci_0461491931..492224 [+], 294160895910XRE family transcriptional regulator 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_010002