SecReT4
T4SS ID345
StrainDelftia acidovorans SPH-1
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010002
Location2959059..2971120
NameTrb
Functionconjugation
ClassificationType IVA; Type P
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01001

The information of T4SS components from NC_010002
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Daci_26842954554..2955759 [-], 1206160898125hypothetical protein 
2Daci_26852955756..2956907 [-], 1152160898126RND family efflux transporter MFP subunit 
3Daci_26862956904..2957512 [-], 609160898127TetR family transcriptional regulator 
4Daci_26872957910..2958164 [+], 255160898128SCO1/SenC family protein 
5Daci_26882958191..2958670 [+], 480160898129hypothetical protein 
6Daci_26892958787..2959062 [-], 276160898130hypothetical protein 
7Daci_26902959059..2960327 [-], 1269160898131conjugation TrbI family protein  TrbI
8Daci_26912960330..2961331 [-], 1002160898132P-type conjugative transfer protein TrbG  TrbG
9Daci_26922961328..2962032 [-], 705160898133conjugal transfer protein TrbF  TrbF
10Daci_26932962051..2963403 [-], 1353160898134conjugal transfer protein TrbL  TrbL
11Daci_26942963400..2963726 [-], 327160898135putative lipoprotein 
12Daci_26952963738..2964493 [-], 756160898136conjugal transfer protein TrbJ  TrbJ
13Daci_26962964490..2966961 [-], 2472160898137conjugal transfer ATPase TrbE  TrbE
14Daci_26972966976..2967248 [-], 273160898138putative conjugal transfer TrbD transmembrane protein  TrbD
15Daci_26982967245..2967622 [-], 378160898139conjugal transfer protein TrbC  TrbC
16Daci_26992967619..2968653 [-], 1035160898140P-type conjugative transfer ATPase TrbB  TrbB
17Daci_27002968650..2969114 [-], 465160898141CopG/DNA-binding domain-containing protein 
18Daci_27012969111..2971120 [-], 2010160898142conjugal transfer coupling protein TraG  TraG
19Daci_27022971337..2971492 [-], 156160898143putative lipoprotein 
20Daci_27032971590..2972504 [-], 915160898144LysR family transcriptional regulator 
21Daci_27042972547..2972969 [-], 423160898145diacylglycerol kinase 
22Daci_27052972981..2974654 [-], 1674160898146sulfatase 
23Daci_27062974651..2975433 [-], 783160898147hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICE(Tn4371)6037 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 0.543055556. [PudMed:19941653] in_silico
 
in_silico This literature contains bioinformatics investigation