SecReT4
T4SS ID353
StrainParvularcula bermudensis HTCC2503
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_014414
Location645186..660990
NameTrb
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_014414
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PB2503_03537641520..642242 [-], 723304320281hypothetical protein 
2PB2503_03542642321..642857 [-], 537304320282hypothetical protein 
3PB2503_03547643125..644195 [-], 1071304320283hypothetical protein 
4PB2503_03552644369..644581 [-], 213304320284hypothetical protein 
5PB2503_03557644601..644918 [-], 318304320285hypothetical protein 
6PB2503_03562644936..645181 [-], 246304320286hypothetical protein 
7PB2503_03567645186..646400 [-], 1215304320287conjugal transfer protein TrbI  TrbI
8PB2503_03572646397..647395 [-], 999304320288conjugal transfer protein TrbG  TrbG
9PB2503_03577647392..648090 [-], 699304320289conjugal transfer trbf transmembrane protein  TrbF
10PB2503_03582648094..649431 [-], 1338304320290conjugal transfer protein TrbL  TrbL
11PB2503_03587649444..650163 [-], 720304320291conjugal transfer protein TrbJ  TrbJ
12PB2503_03592650148..652586 [-], 2439304320292conjugal transfer protein Trbe  TrbE
13PB2503_03597652583..652834 [-], 252304320293conjugal transfer trbd transmembrane protein  TrbD
14PB2503_03602652834..653151 [-], 318304320294conjugal transfer protein  TrbC
15PB2503_03607653148..654146 [-], 999304320295conjugal transfer protein TraB  TrbB
16PB2503_03612654133..654624 [-], 492304320296hypothetical protein 
17PB2503_03617654628..656616 [-], 1989304320297conjugal transfer protein TraG  TraG
18PB2503_03622657155..658297 [+], 1143304320298hypothetical protein 
19PB2503_03627658329..660245 [-], 1917304320299hypothetical protein 
20PB2503_03632660427..660990 [-], 564304320300plasmid transfer protein traf  TraF
21PB2503_03637660975..661430 [-], 456304320301hypothetical protein 
22PB2503_03642661417..661671 [-], 255304320302hypothetical protein 
23PB2503_03647661810..662661 [-], 852304320303hypothetical protein 
24PB2503_03652662793..663131 [-], 339304320304hypothetical protein 
25PB2503_03657663513..663752 [-], 240304320305transcriptional regulator 
26PB2503_03662663851..664135 [+], 285304320306hypothetical protein 
27PB2503_03667664139..665866 [-], 1728304320307partitioning protein-like protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Oh HM; Kang I; Vergin KL; Kang D; Rhee KH; Giovannoni SJ; Cho JC (2011). Complete genome sequence of strain HTCC2503T of Parvularcula bermudensis, the type species of the order "Parvularculales" in the class Alphaproteobacteria. J Bacteriol. 193(1):305-6. [PudMed:21037002]