SecReT4
T4SS ID359
StrainOligotropha carboxidovorans OM5
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_011386
Location2362335..2391663
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_011386
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1OCAR_64192359626..2360636 [-], 1011209885540ATPase AAA 
2OCAR_64202360890..2361705 [+], 816209885541hypothetical protein 
3OCAR_64212362102..2362338 [-], 237209885542hypothetical protein 
4OCAR_64222362335..2363543 [-], 1209209885543conjugal transfer protein TrbI  TrbI
5OCAR_64232363543..2364583 [-], 1041209885544conjugal transfer protein TrbG/VirB9/CagX  TrbG
6OCAR_64242364583..2365269 [-], 687209885545conjugal transfer protein TrbF  TrbF
7OCAR_6425 (trbL2)2365266..2366672 [-], 1407209885546conjugal transfer protein TrbL  TrbL
8OCAR_6426 (trbJ2)2366946..2367698 [-], 753209885547conjugal transfer protein TrbJ  TrbJ
9OCAR_64272367695..2370199 [-], 2505209885548conjugal transfer ATPase TrbE  TrbE
10OCAR_64282370209..2370472 [-], 264209885549conjugal transfer protein  TrbD
11OCAR_64292370472..2370807 [-], 336209885550conjugal transfer protein TrbC  TrbC
12OCAR_6430 (trbB2)2370804..2371802 [-], 999209885551P-type conjugative transfer ATPase TrbB  TrbB
13OCAR_64312371993..2372973 [-], 981209885552LysR family transcriptional regulator 
14OCAR_64322372945..2373844 [-], 900209885553zinc transporter ZitB 
15OCAR_64332373848..2374684 [-], 837209885554hypothetical protein 
16OCAR_64342374681..2375169 [-], 489209885555hypothetical protein 
17OCAR_64352375229..2375369 [-], 141209885556type IV pilus assembly PilZ 
18OCAR_6436 (cadA2)2375540..2377732 [-], 2193209885557cadmium-translocating P-type ATPase 
19OCAR_64372377719..2380949 [-], 3231209885558cation efflux system protein CzcA 
20OCAR_64382381298..2382266 [-], 969209885559secretion protein HlyD 
21OCAR_64392382263..2383537 [-], 1275209885560outer membrane efflux protein 
22OCAR_64402384155..2384634 [-], 480209885561CopG family transcriptional regulator 
23OCAR_64412384638..2386653 [-], 2016209885562conjugal transfer coupling protein TraG  TraG
24OCAR_64422386811..2387473 [-], 663209885563tena/thi-4 family 
25OCAR_64432387545..2389281 [-], 1737209885564type IV secretory pathway VirD2 components 
26OCAR_64442389520..2390281 [-], 762209885565lytic transglycosylase, catalytic  TrbN
27OCAR_64452390294..2390434 [+], 141209885566hypothetical protein 
28OCAR_64462390460..2390699 [-], 240209885567hypothetical protein 
29OCAR_64472390738..2391067 [-], 330209885568hypothetical protein 
30OCAR_64482391103..2391663 [-], 561209885569conjugal transfer protein  TraF
31OCAR_64492391660..2392154 [-], 495209885570hypothetical protein 
32OCAR_64502392151..2392909 [-], 759209885571DNA methylase 
33OCAR_64512393169..2394032 [-], 864209885572replication protein A 
34OCAR_64522394041..2394283 [-], 243209885573phage transcriptional regulator AlpA 
35OCAR_64532394419..2394970 [-], 552209885574hypothetical protein 
36OCAR_64542395359..2395622 [-], 264209885575hypothetical protein 
37OCAR_64552395850..2396065 [+], 216209885576hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_011386