SecReT4
T4SS ID384
StrainPseudomonas putida plasmid pDTG1 (NC_004999)
Repliconplasmid pDTG1 [Browse all T4SS(s) in this replicon]
AccessionNC_004999
Location64674..82611
NameVirB
Functionconjugation
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_004999
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pDTG1p6459741..60070 [+], 33032469940putative regulatory protein 
2pDTG1p6560783..61301 [-], 51932469941hypothetical protein 
3pDTG1p6661376..62161 [-], 78632469942putative zinc metalloprotease 
4pDTG1p6762179..63468 [+], 129032469943hypothetical protein 
5pDTG1p6862689..63408 [-], 72032469944hypothetical protein 
6pDTG1p69 (traD)63405..63860 [-], 45632469945putative TraD protein 
7pDTG1p70 (traA)64289..64681 [+], 39332469946putative TraA protein 
8pDTG1p71 (traB)64674..66230 [+], 155732469947putative TraB protein  VirD4
9pDTG1p72 (traC)66241..69186 [+], 294632469948putative TraC protein 
10pDTG1p7369263..69844 [+], 58232469949hypothetical protein 
11pDTG1p7470173..70811 [-], 63932469950putative nuclease 
12pDTG1p7570859..71341 [-], 48332469951hypothetical protein 
13pDTG1p7671356..71961 [-], 60632469952putative nuclease 
14pDTG1p7771951..72280 [-], 33032469953hypothetical protein 
15pDTG1p78 (mpfJ)72310..73215 [-], 90632469954putative mating pair formation protein  VirB1
16pDTG1p79 (mpfI)73199..74227 [-], 102932469955putative mating pair formation protein  VirB11
17pDTG1p80 (mpfH)74237..75520 [-], 128432469956putative mating pair formation protein  VirB10
18pDTG1p81 (mpfG)75523..76314 [-], 79232469957putative mating pair formation protein  VirB9
19pDTG1p82 (mpfF)76339..77004 [-], 66632469958putative mating pair formation protein  VirB8
20pDTG1p83 (mpfE)77008..77871 [-], 86432469959putative mating pair formation protein  VirB6
21pDTG1p8477859..78263 [-], 40532469960hypothetical protein 
22pDTG1p8578256..78468 [-], 21332469961hypothetical protein 
23pDTG1p86 (mpfD)78496..79185 [-], 69032469962putative mating pair formation protein  VirB5
24pDTG1p87 (mpfC)79182..81866 [-], 268532469963putative mating pair formation protein  VirB4
25pDTG1p88 (mpfB)81853..82146 [-], 29432469964putative mating pair formation protein  VirB3
26pDTG1p89 (mpfA)82150..82611 [-], 46232469965putative mating pair formation protein  VirB2
27pDTG1p9082628..82975 [-], 34832469966hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Dennis JJ; Zylstra GJ (2004). Complete sequence and genetic organization of pDTG1, the 83 kilobase naphthalene degradation plasmid from Pseudomonas putida strain NCIB 9816-4. J Mol Biol. 341(3):753-68. [PudMed:15288784]