SecReT4
T4SS ID385
StrainPseudomonas putida plasmid NAH7 (NC_007926)
Repliconplasmid NAH7 [Browse all T4SS(s) in this replicon]
AccessionNC_007926
Location20573..22132; 70997..81295
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_007926
Region 1: 20573..22132
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1NAH7_22 (orf13)16764..17129 [-], 36690576566hypothetical protein 
2NAH7_23 (orf14)17273..18058 [-], 78690576567putative zinc metalloprotease protein 
3NAH7_24 (orf15)18196..18582 [-], 38790576568hypothetical protein 
4NAH7_25 (orf16)18586..19305 [-], 72090576569hypothetical protein 
5NAH7_26 (traD)19302..19757 [-], 45690576570putative plasmid transfer protein TraD 
6NAH7_27 (traA)20188..20580 [+], 39390576571putative plasmid transfer protein TraA 
7NAH7_28 (traB)20573..22132 [+], 156090576572putative plasmid transfer protein TraB  VirD4
8NAH7_29 (traC)22143..25079 [+], 293790576573putative plasmid transfer protein TraC 
9NAH7_30 (orf17)25155..25904 [+], 75090576574hypothetical protein 
10NAH7_31 (orf18)25934..26467 [-], 53490576575putative nudix hydrolase 
 
Region 2: 70997..81295
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1NAH7_66 (orf29)66544..68031 [-], 148890576610putative sulfate permease protein 
2NAH7_67 (orf30)68550..68846 [-], 29790576611hypothetical protein 
3NAH7_68 (orf31)68860..69498 [-], 63990576612putative nuclease protein 
4NAH7_69 (orf32)69546..70028 [-], 48390576613hypothetical protein 
5NAH7_70 (orf33)70043..70648 [-], 60690576614putative nuclease protein 
6NAH7_71 (orf34)70638..70967 [-], 33090576615hypothetical protein 
7NAH7_72 (mpfJ)70997..71902 [-], 90690576616putative mating pair formation protein MpfJ  VirB1
8NAH7_73 (mpfI)71886..72914 [-], 102990576617putative mating pair formation protein MpfI  VirB11
9NAH7_74 (mpfH)72924..74207 [-], 128490576618putative mating pair formation protein MpfH  VirB10
10NAH7_75 (mpfG)74210..75001 [-], 79290576619putative mating pair formation protein MpfG  VirB9
11NAH7_76 (mpfF)75026..75691 [-], 66690576620putative mating pair formation protein MpfF  VirB8
12NAH7_77 (mpfE)75695..76558 [-], 86490576621putative mating pair formation protein MpfE  VirB6
13NAH7_78 (orf35)76546..76950 [-], 40590576622hypothetical protein 
14NAH7_79 (orf36)76943..77155 [-], 21390576623hypothetical protein 
15NAH7_80 (mpfD)77183..77866 [-], 68490576624putative mating pair formation protein MpfD  VirB5
16NAH7_81 (mpfC)77866..80550 [-], 268590576625putative mating pair formation protein MpfC  VirB4
17NAH7_82 (mpfB)80537..80830 [-], 29490576626putative mating pair formation protein MpfB  VirB3
18NAH7_83 (mpfA)80834..81295 [-], 46290576627putative mating pair formation protein MpfA  VirB2
19NAH7_84 (orf37)81312..81659 [-], 34890576628hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_007926