SecReT4
T4SS ID388
StrainXanthomonas campestris pv. campestris str. 8004
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_007086
Location1956087..1966861
NameVirB
Functioneffector translocation
ClassificationType IVA; Type P
experimental Experimental investigation has been performed on this T4SS.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111100011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_007086
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1XC_16261951975..1952343 [+], 36966767950type IV pilin 
2XC_16271952524..1953075 [-], 55266767951fimbrial biogenesis protein 
3XC_16281953215..1955236 [+], 202266767952excinuclease ABC subunit B 
4XC_16291955811..1956053 [+], 24366767953hypothetical protein 
5XC_16301956087..1957760 [+], 167466767954VirD4 protein  VirD4
6XC_16311958257..1958499 [+], 24366767955hypothetical protein 
7XC_16321958610..1959653 [+], 104466767956VirB8 protein  VirB8
8XC_16331959650..1960417 [+], 76866767957VirB9 protein  VirB9
9XC_16341960414..1961595 [+], 118266767958VirB10 protein  VirB10
10XC_16351961592..1962650 [+], 105966767959VirB11 protein  VirB11
11XC_16361962696..1963529 [+], 83466767960VirB1 protein  VirB1
12XC_16371963592..1963996 [+], 40566767961VirB2 protein  VirB2
13XC_16381963989..1964300 [+], 31266767962VirB3 protein  VirB3
14XC_16391964408..1966861 [+], 245466767963VirB4 protein  VirB4
15XC_16401967008..1967151 [-], 14466767964hypothetical protein 
16XC_16411967589..1968956 [+], 136866767965IS1478 transposase 
17XC_16421969222..1970838 [+], 161766767966alpha-glucosidase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
The Effector information is not available.
(1) He YQ; Zhang L; Jiang BL; Zhang ZC; Xu RQ; Tang DJ; Qin J; Jiang W; Zhang X; Liao J; Cao JR; Zhang SS; Wei ML; Liang XX; Lu GT; Feng JX; Chen B; Cheng J; Tang JL (2007). Comparative and functional genomics reveals genetic diversity and determinants of host specificity among reference strains and a large collection of Chinese isolates of the phytopathogen Xanthomonas campestris pv. campestris. Genome Biol. 8(10):R218. [PudMed:17927820] experimental
(2) Qian W; Jia Y; Ren SX; He YQ; Feng JX; Lu LF; Sun Q; Ying G; Tang DJ; Tang H; Wu W; Hao P; Wang L; Jiang BL; Zeng S; Gu WY; Lu G; Rong L; Tian Y; Yao Z; Fu G; Chen B; Fang R; Qiang B; Chen Z; Zhao GP; Tang JL; He C (2005). Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris. Genome Res. 15(6):757-67. [PudMed:15899963]
 
experimental This literature contains experimental investigation