SecReT4
T4SS ID394
StrainDickeya dadantii Ech586
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_013592
Location1646994..1659857
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number110111011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_013592
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Dd586_14461642934..1643437 [+], 504271499994cell wall assembly/cell proliferation coordinating protein 
2Dd586_14471643475..1645013 [+], 1539271499995hypothetical protein 
3Dd586_14481645024..1646046 [+], 1023271499996hypothetical protein 
4Dd586_14491646239..1646985 [-], 747271499997mobilization protein 
5Dd586_14501646994..1648856 [-], 1863271499998mobilization protein  VirD4
6Dd586_14511649793..1650095 [-], 303271499999putative lipoprotein 
7Dd586_14521650136..1651152 [-], 1017271500000Sigma 54 interacting domain-containing protein  VirB11
8Dd586_14531651142..1652350 [-], 1209271500001conjugation TrbI family protein  VirB10
9Dd586_14541652347..1653237 [-], 891271500002P-type conjugative transfer protein VirB9  VirB9
10Dd586_14551653237..1653920 [-], 684271500003VirB8 family protein  VirB8
11Dd586_14561654141..1655169 [-], 1029271500004TrbL/VirB6 plasmid conjugal transfer protein  VirB6
12Dd586_14571655181..1655405 [-], 225271500005hypothetical protein 
13Dd586_14581655416..1656132 [-], 717271500006type IV secretion system family protein  VirB5
14Dd586_14591656157..1658904 [-], 2748271500007CagE, TrbE, VirB component of type IV transporter system  VirB4
15Dd586_14601658915..1659190 [-], 276271500008Conjugal transfer protein TrbC  VirB2
16Dd586_14611659210..1659857 [-], 648271500009Lytic transglycosylase catalytic  VirB1
17Dd586_14621659927..1660163 [-], 237271500010hypothetical protein 
18Dd586_14631660688..1661554 [+], 867271500011hypothetical protein 
19Dd586_14641661927..1662136 [-], 210271500012TraR/DksA family transcriptional regulator 
20Dd586_14651662126..1662710 [-], 585271500013hypothetical protein 
21Dd586_14661662727..1662921 [-], 195271500014phage transcriptional regulator AlpA 
22Dd586_14671663419..1663676 [-], 258271500015XRE family transcriptional regulator 
23Dd586_14681663790..1664068 [-], 279271500016XRE family transcriptional regulator 
24Dd586_14691664202..1664471 [+], 270271500017putative transcriptional regulator Nlp 
25Dd586_14701664683..1664853 [+], 171271500018hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_013592