SecReT4
T4SS ID401
StrainEscherichia coli UMN026
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_011751
Location2312196..2327010
NameVirB
Functionconjugation
ClassificationType IVA; Type P
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number110112011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_011751
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ECUMN_22792308691..2309674 [+], 984218705478hypothetical protein 
2ECUMN_22802310018..2310203 [+], 186218705479hypothetical protein 
3ECUMN_22812310188..2310769 [+], 582218705480hypothetical protein 
4ECUMN_22822310759..2310968 [+], 210218705481putative lambdoid prophage protein 
5ECUMN_22832311211..2311339 [+], 129218705482hypothetical protein 
6ECUMN_22842312196..2312924 [+], 729218705483putative type IV secretory pathway VirB1 component  VirB1
7ECUMN_22852312924..2313217 [+], 294218705484putative type IV secretory pathway VirB2 component  VirB2
8ECUMN_22862313230..2315968 [+], 2739218705485putative type IV secretory pathway VirB4 component  VirB4
9ECUMN_22872315987..2316700 [+], 714218705486putative type IV secretory pathway VirB5 component  VirB5
10ECUMN_22882316708..2316950 [+], 243218705487hypothetical protein 
11ECUMN_22892316954..2317298 [+], 345218705488type IV secretory pathway VirB6 component (fragment)  VirB6
12ECUMN_2290 (insH)2317336..2318352 [-], 1017218705489IS5 transposase and trans-activator; CP4-44 prophage 
13ECUMN_22912318315..2319226 [+], 912218705490type IV secretory pathway VirB6 component (fragment)  VirB6
14ECUMN_22922319444..2320127 [+], 684218705491putative type IV secretory pathway VirB8 component  VirB8
15ECUMN_22932320124..2321032 [+], 909218705492putative type IV secretory pathway VirB9 component  VirB9
16ECUMN_22942321070..2322338 [+], 1269218705493putative type IV secretory pathway VirB10 component  VirB10
17ECUMN_22952322328..2323353 [+], 1026218705494putative type IV secretory pathway VirB11 component  VirB11
18ECUMN_22972323789..2324091 [+], 303218705495kikA from plasmid origin 
19ECUMN_22982324136..2324441 [+], 306218705496hypothetical protein 
20ECUMN_22992325151..2327010 [+], 1860218705497putative MobB mobilization protein  VirD4
21ECUMN_23002327014..2327766 [+], 753218705498putative MobC mobilization protein 
22ECUMN_23012327959..2329098 [-], 1140218705499putative Antirestriction protein ardC 
23ECUMN_23022329140..2329373 [+], 234218705500hypothetical protein 
24ECUMN_23032329496..2329807 [+], 312218705501hypothetical protein 
25ECUMN_23042329909..2330904 [+], 996218705502hypothetical protein 
26ECUMN_23052330901..2331989 [+], 1089218705503hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEEcoUMN026-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation