SecReT4
T4SS ID407
StrainCitrobacter koseri ATCC BAA-895
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_009792
Location870917..884763
NameVirB
Functionconjugation
ClassificationType IVA; Type P
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number110111111
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_009792
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1CKO_00875866152..867612 [+], 1461157145142hypothetical protein 
2CKO_00876867758..868327 [+], 570157145143hypothetical protein 
3CKO_00877868362..868874 [+], 513157145144hypothetical protein 
4CKO_00878869101..869256 [+], 156157145145hypothetical protein 
5CKO_00879870144..870908 [-], 765157145146hypothetical protein 
6CKO_00880870917..872671 [-], 1755157145147hypothetical protein  VirD4
7CKO_00881872747..873001 [-], 255157145148hypothetical protein 
8CKO_00882873294..873581 [+], 288157145149hypothetical protein 
9CKO_00883873434..873739 [-], 306157145150hypothetical protein 
10CKO_00884873782..874150 [-], 369157145151hypothetical protein 
11CKO_00885874117..874515 [-], 399157145152hypothetical protein 
12CKO_00886874512..875537 [-], 1026157145153hypothetical protein  VirB11
13CKO_00888875527..875847 [-], 321157145155hypothetical protein 
14CKO_00887875696..875869 [+], 174157145154hypothetical protein 
15CKO_00889875859..877103 [-], 1245157145156hypothetical protein  VirB10
16CKO_00890877147..878055 [-], 909157145157hypothetical protein  VirB9
17CKO_00891878052..878735 [-], 684157145158hypothetical protein  VirB8
18CKO_00892878728..878880 [-], 153157145159hypothetical protein  VirB7
19CKO_00893878957..880030 [-], 1074157145160hypothetical protein  VirB6
20CKO_00894880034..880276 [-], 243157145161hypothetical protein 
21CKO_00895880284..880991 [-], 708157145162hypothetical protein  VirB5
22CKO_00896881009..883747 [-], 2739157145163hypothetical protein  VirB4
23CKO_00897883760..884053 [-], 294157145164hypothetical protein  VirB2
24CKO_00898884053..884763 [-], 711157145165hypothetical protein  VirB1
25CKO_00899884836..885069 [-], 234157145166hypothetical protein 
26CKO_00900885330..885470 [+], 141157145167hypothetical protein 
27CKO_00901885638..885766 [-], 129157145168hypothetical protein 
28CKO_00902886208..886789 [-], 582157145169hypothetical protein 
29CKO_00903886978..887163 [-], 186157145170hypothetical protein 
30CKO_00904887303..888229 [-], 927157145171hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICECkoBAA-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation