SecReT4
T4SS ID419
StrainAnaplasma marginale str. Florida
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_012026
Location734959..752816; 1159067..1164774
NameVirB
Functioneffector translocation
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number001102001
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_012026
Region 1: 734959..752816
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1AMF_597 (ispH)730993..732021 [+], 10292224752814-hydroxy-3-methylbut-2-enyl diphosphate reductase 
2AMF_598 (dut)732223..732666 [+], 444222475282deoxyuridine 5'triphosphate nucleotidohydrolase (dut) 
3AMF_599 (murF)732713..734143 [-], 1431222475283UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase (murF) 
4AMF_601734327..734944 [+], 618222475284hypothetical protein 
5AMF_602734959..740241 [-], 5283222475285hypothetical protein  VirB6
6AMF_603740204..744334 [-], 4131222475286hypothetical protein 
7AMF_604744346..747411 [-], 3066222475287hypothetical protein 
8AMF_605 (virB6)747464..750145 [-], 2682222475288VirB6  VirB6
9AMF_606 (virB4)750087..752495 [-], 2409222475289type IV secretion system ATPase VirB4  VirB4
10AMF_607 (virB3)752499..752816 [-], 318222475290type IV secretion system protein VirB3  VirB3
11AMF_608 (sodB)752889..753560 [-], 672222475291superoxide dismutase 
12AMF_609 (pstA)753646..755109 [+], 1464222475292phosphate ABC transporter (pstA) 
13AMF_610 (lipA)755332..756273 [-], 942222475293lipoyl synthase 
 
Region 2: 1159067..1164774
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1AMF_9861154142..1155401 [-], 1260222475643hypothetical protein 
2AMF_9871155441..1156241 [+], 801222475644hypothetical protein 
3AMF_988 (nadA)1156261..1157217 [+], 957222475645quinolinate synthetase 
4AMF_989 (fdxA)1157239..1157610 [-], 372222475646ferredoxin II (fdxA) 
5AMF_990 (ilvC)1157736..1158707 [+], 972222475647ketol-acid reductoisomerase 
6AMF_991 (infC)1158750..1159067 [-], 318222475648translation initiation factor IF-3 (infC) 
7AMF_992 (virD4)1159067..1161487 [-], 2421222475649type IV secretion system component VirD4  VirD4
8AMF_993 (virB11)1161535..1162548 [-], 1014222475650type IV secretion system ATPase VirB11  VirB11
9AMF_994 (virB10)1162590..1163927 [-], 1338222475651VirB10 protein (virB10)  VirB10
10AMF_995 (virB9)1163935..1164774 [-], 840222475652VirB9 protein  VirB9
11AMF_996 (virB8)1164761..1165450 [-], 690222475653VirB8 protein 
12AMF_997 (ribA)1165569..1166702 [-], 1134222475654GTP cyclohydrolase II 
13AMF_9981166819..1168045 [-], 1227222475655hypothetical protein 
14AMF_9991168002..1168529 [-], 528222475656hypothetical protein 
15AMF_1002 (dapF)1168590..1169423 [-], 834222475657diaminopimelate epimerase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes

Effectors
AMF_136, AMF_343, AnkA

The information of protein effectors
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  *
1AMF_136 156205..158601 [+], 2397222474865hypothetical protein  AMF_136
2AMF_343 420229..424017 [-], 3789222475053hypothetical protein  AMF_343
3AMF_526 (ankA)639319..643485 [+], 4167222475218ankyrin  AnkA

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Proteins        Genes
Identified as part of this study from NC_012026